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True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach

Three‐dimensional computer graphics are increasingly used for scientific visualization and for communicating anatomical knowledge and data. This study presents a practical method to produce true‐color 3D surface renditions of anatomical structures. The procedure involves extracting the surface geome...

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Detalles Bibliográficos
Autor principal: Azkue, Jon Jatsu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296043/
https://www.ncbi.nlm.nih.gov/pubmed/35224742
http://dx.doi.org/10.1111/joa.13647
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author Azkue, Jon Jatsu
author_facet Azkue, Jon Jatsu
author_sort Azkue, Jon Jatsu
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description Three‐dimensional computer graphics are increasingly used for scientific visualization and for communicating anatomical knowledge and data. This study presents a practical method to produce true‐color 3D surface renditions of anatomical structures. The procedure involves extracting the surface geometry of the structure of interest from a stack of cadaver cryosection images, using the extracted surface as a probe to retrieve color information from cryosection data, and mapping sampled colors back onto the surface model to produce a true‐color rendition. Organs and body parts can be rendered separately or in combination to create custom anatomical scenes. By editing the surface probe, structures of interest can be rendered as if they had been previously dissected or prepared for anatomical demonstration. The procedure is highly flexible and nondestructive, offering new opportunities to present and communicate anatomical information and knowledge in a visually realistic manner. The technical procedure is described, including freely available open‐source software tools involved in the production process, and examples of color surface renderings of anatomical structures are provided.
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spelling pubmed-92960432022-07-20 True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach Azkue, Jon Jatsu J Anat Original Article Three‐dimensional computer graphics are increasingly used for scientific visualization and for communicating anatomical knowledge and data. This study presents a practical method to produce true‐color 3D surface renditions of anatomical structures. The procedure involves extracting the surface geometry of the structure of interest from a stack of cadaver cryosection images, using the extracted surface as a probe to retrieve color information from cryosection data, and mapping sampled colors back onto the surface model to produce a true‐color rendition. Organs and body parts can be rendered separately or in combination to create custom anatomical scenes. By editing the surface probe, structures of interest can be rendered as if they had been previously dissected or prepared for anatomical demonstration. The procedure is highly flexible and nondestructive, offering new opportunities to present and communicate anatomical information and knowledge in a visually realistic manner. The technical procedure is described, including freely available open‐source software tools involved in the production process, and examples of color surface renderings of anatomical structures are provided. John Wiley and Sons Inc. 2022-02-27 2022-08 /pmc/articles/PMC9296043/ /pubmed/35224742 http://dx.doi.org/10.1111/joa.13647 Text en © 2022 The Author. Journal of Anatomy published by John Wiley & Sons Ltd on behalf of Anatomical Society. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Article
Azkue, Jon Jatsu
True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title_full True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title_fullStr True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title_full_unstemmed True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title_short True‐color 3D rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: A practical approach
title_sort true‐color 3d rendering of human anatomy using surface‐guided color sampling from cadaver cryosection image data: a practical approach
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296043/
https://www.ncbi.nlm.nih.gov/pubmed/35224742
http://dx.doi.org/10.1111/joa.13647
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