Cargando…

External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients

BACKGROUND AND AIMS: Unhealthy alcohol use (UAU) is one of the leading causes of global morbidity. A machine learning approach to alcohol screening could accelerate best practices when integrated into electronic health record (EHR) systems. This study aimed to validate externally a natural language...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Yiqi, Sharma, Brihat, Thompson, Hale M., Boley, Randy, Perticone, Kathryn, Chhabra, Neeraj, Afshar, Majid, Karnik, Niranjan S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296269/
https://www.ncbi.nlm.nih.gov/pubmed/34729829
http://dx.doi.org/10.1111/add.15730
_version_ 1784750234908229632
author Lin, Yiqi
Sharma, Brihat
Thompson, Hale M.
Boley, Randy
Perticone, Kathryn
Chhabra, Neeraj
Afshar, Majid
Karnik, Niranjan S.
author_facet Lin, Yiqi
Sharma, Brihat
Thompson, Hale M.
Boley, Randy
Perticone, Kathryn
Chhabra, Neeraj
Afshar, Majid
Karnik, Niranjan S.
author_sort Lin, Yiqi
collection PubMed
description BACKGROUND AND AIMS: Unhealthy alcohol use (UAU) is one of the leading causes of global morbidity. A machine learning approach to alcohol screening could accelerate best practices when integrated into electronic health record (EHR) systems. This study aimed to validate externally a natural language processing (NLP) classifier developed at an independent medical center. DESIGN: Retrospective cohort study. SETTING: The site for validation was a midwestern United States tertiary‐care, urban medical center that has an inpatient structured universal screening model for unhealthy substance use and an active addiction consult service. PARTICIPANTS/CASES: Unplanned admissions of adult patients between October 23, 2017 and December 31, 2019, with EHR documentation of manual alcohol screening were included in the cohort (n = 57 605). MEASUREMENTS: The Alcohol Use Disorders Identification Test (AUDIT) served as the reference standard. AUDIT scores ≥5 for females and ≥8 for males served as cases for UAU. To examine error in manual screening or under‐reporting, a post hoc error analysis was conducted, reviewing discordance between the NLP classifier and AUDIT‐derived reference. All clinical notes excluding the manual screening and AUDIT documentation from the EHR were included in the NLP analysis. FINDINGS: Using clinical notes from the first 24 hours of each encounter, the NLP classifier demonstrated an area under the receiver operating characteristic curve (AUCROC) and precision‐recall area under the curve (PRAUC) of 0.91 (95% CI = 0.89–0.92) and 0.56 (95% CI = 0.53–0.60), respectively. At the optimal cut point of 0.5, sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) were 0.66 (95% CI = 0.62–0.69), 0.98 (95% CI = 0.98–0.98), 0.35 (95% CI = 0.33–0.38), and 1.0 (95% CI = 1.0–1.0), respectively. CONCLUSIONS: External validation of a publicly available alcohol misuse classifier demonstrates adequate sensitivity and specificity for routine clinical use as an automated screening tool for identifying at‐risk patients.
format Online
Article
Text
id pubmed-9296269
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-92962692022-07-19 External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients Lin, Yiqi Sharma, Brihat Thompson, Hale M. Boley, Randy Perticone, Kathryn Chhabra, Neeraj Afshar, Majid Karnik, Niranjan S. Addiction Research Reports BACKGROUND AND AIMS: Unhealthy alcohol use (UAU) is one of the leading causes of global morbidity. A machine learning approach to alcohol screening could accelerate best practices when integrated into electronic health record (EHR) systems. This study aimed to validate externally a natural language processing (NLP) classifier developed at an independent medical center. DESIGN: Retrospective cohort study. SETTING: The site for validation was a midwestern United States tertiary‐care, urban medical center that has an inpatient structured universal screening model for unhealthy substance use and an active addiction consult service. PARTICIPANTS/CASES: Unplanned admissions of adult patients between October 23, 2017 and December 31, 2019, with EHR documentation of manual alcohol screening were included in the cohort (n = 57 605). MEASUREMENTS: The Alcohol Use Disorders Identification Test (AUDIT) served as the reference standard. AUDIT scores ≥5 for females and ≥8 for males served as cases for UAU. To examine error in manual screening or under‐reporting, a post hoc error analysis was conducted, reviewing discordance between the NLP classifier and AUDIT‐derived reference. All clinical notes excluding the manual screening and AUDIT documentation from the EHR were included in the NLP analysis. FINDINGS: Using clinical notes from the first 24 hours of each encounter, the NLP classifier demonstrated an area under the receiver operating characteristic curve (AUCROC) and precision‐recall area under the curve (PRAUC) of 0.91 (95% CI = 0.89–0.92) and 0.56 (95% CI = 0.53–0.60), respectively. At the optimal cut point of 0.5, sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) were 0.66 (95% CI = 0.62–0.69), 0.98 (95% CI = 0.98–0.98), 0.35 (95% CI = 0.33–0.38), and 1.0 (95% CI = 1.0–1.0), respectively. CONCLUSIONS: External validation of a publicly available alcohol misuse classifier demonstrates adequate sensitivity and specificity for routine clinical use as an automated screening tool for identifying at‐risk patients. John Wiley and Sons Inc. 2021-11-23 2022-04 /pmc/articles/PMC9296269/ /pubmed/34729829 http://dx.doi.org/10.1111/add.15730 Text en © 2021 The Authors. Addiction published by John Wiley & Sons Ltd on behalf of Society for the Study of Addiction. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Reports
Lin, Yiqi
Sharma, Brihat
Thompson, Hale M.
Boley, Randy
Perticone, Kathryn
Chhabra, Neeraj
Afshar, Majid
Karnik, Niranjan S.
External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title_full External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title_fullStr External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title_full_unstemmed External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title_short External validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
title_sort external validation of a machine learning classifier to identify unhealthy alcohol use in hospitalized patients
topic Research Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9296269/
https://www.ncbi.nlm.nih.gov/pubmed/34729829
http://dx.doi.org/10.1111/add.15730
work_keys_str_mv AT linyiqi externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT sharmabrihat externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT thompsonhalem externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT boleyrandy externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT perticonekathryn externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT chhabraneeraj externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT afsharmajid externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients
AT karnikniranjans externalvalidationofamachinelearningclassifiertoidentifyunhealthyalcoholuseinhospitalizedpatients