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An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China

The COVID-19 pandemic has necessitated the rapid expansion of laboratories that conduct SARS-CoV-2 tests. A provincial external quality assessment (EQA) scheme on SARS-CoV-2 tests was organized by Zhejiang Provincial CDC to assess the accuracy of the tests in individual CDC municipal and county labo...

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Autores principales: Pan, Junhang, Yan, Hao, Li, Zhen, Lou, Xiuyu, Mao, Haiyan, Shi, Wen, Yao, Wenwu, Zhang, Yanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Published by Elsevier Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9297680/
https://www.ncbi.nlm.nih.gov/pubmed/36084422
http://dx.doi.org/10.1016/j.diagmicrobio.2022.115766
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author Pan, Junhang
Yan, Hao
Li, Zhen
Lou, Xiuyu
Mao, Haiyan
Shi, Wen
Yao, Wenwu
Zhang, Yanjun
author_facet Pan, Junhang
Yan, Hao
Li, Zhen
Lou, Xiuyu
Mao, Haiyan
Shi, Wen
Yao, Wenwu
Zhang, Yanjun
author_sort Pan, Junhang
collection PubMed
description The COVID-19 pandemic has necessitated the rapid expansion of laboratories that conduct SARS-CoV-2 tests. A provincial external quality assessment (EQA) scheme on SARS-CoV-2 tests was organized by Zhejiang Provincial CDC to assess the accuracy of the tests in individual CDC municipal and county laboratories in Zhejiang Province, China. Three positive samples in high, medium, and low concentrations, respectively, were prepared using the serial dilutions from the culture with the viral titer concentration of 1×10(6.3) TCID50/mL, and one negative sample were included. A total of 93 laboratories participated, contributing results from 36 distinct combinations of nucleic acid extraction methods and PCR reagents. There was 100% concordance among all laboratories for all EQA samples, and no false-positive or false-negative results were observed. The EQA survey provides confidence in the identification of infected individuals or asymptomatic populations and assurance for clinical and public health decision-making based on test results.
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spelling pubmed-92976802022-07-20 An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China Pan, Junhang Yan, Hao Li, Zhen Lou, Xiuyu Mao, Haiyan Shi, Wen Yao, Wenwu Zhang, Yanjun Diagn Microbiol Infect Dis Article The COVID-19 pandemic has necessitated the rapid expansion of laboratories that conduct SARS-CoV-2 tests. A provincial external quality assessment (EQA) scheme on SARS-CoV-2 tests was organized by Zhejiang Provincial CDC to assess the accuracy of the tests in individual CDC municipal and county laboratories in Zhejiang Province, China. Three positive samples in high, medium, and low concentrations, respectively, were prepared using the serial dilutions from the culture with the viral titer concentration of 1×10(6.3) TCID50/mL, and one negative sample were included. A total of 93 laboratories participated, contributing results from 36 distinct combinations of nucleic acid extraction methods and PCR reagents. There was 100% concordance among all laboratories for all EQA samples, and no false-positive or false-negative results were observed. The EQA survey provides confidence in the identification of infected individuals or asymptomatic populations and assurance for clinical and public health decision-making based on test results. Published by Elsevier Inc. 2022-11 2022-07-20 /pmc/articles/PMC9297680/ /pubmed/36084422 http://dx.doi.org/10.1016/j.diagmicrobio.2022.115766 Text en © 2022 Published by Elsevier Inc. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Pan, Junhang
Yan, Hao
Li, Zhen
Lou, Xiuyu
Mao, Haiyan
Shi, Wen
Yao, Wenwu
Zhang, Yanjun
An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title_full An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title_fullStr An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title_full_unstemmed An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title_short An external quality assessment for the molecular testing of the SARS-CoV-2 virus genome in Zhejiang Province, China
title_sort external quality assessment for the molecular testing of the sars-cov-2 virus genome in zhejiang province, china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9297680/
https://www.ncbi.nlm.nih.gov/pubmed/36084422
http://dx.doi.org/10.1016/j.diagmicrobio.2022.115766
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