The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant

Rubus rosifolius belongs to the genus Rubus in the family Rosaceae and is widely distributed globally. It has white flowers and red fruits. Moreover, it has medicinal value for diseases of the stomach and other areas. However, the complete chloroplast (cp) genome of R. rosifolius remains unclear. In...

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Autores principales: Yang, Xuelian, Wang, Xia, Wu, Yongfei, Yan, Li, Hu, Xiaojing, Zhang, Wanping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9297712/
https://www.ncbi.nlm.nih.gov/pubmed/35874281
http://dx.doi.org/10.1080/23802359.2022.2093669
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author Yang, Xuelian
Wang, Xia
Wu, Yongfei
Yan, Li
Hu, Xiaojing
Zhang, Wanping
author_facet Yang, Xuelian
Wang, Xia
Wu, Yongfei
Yan, Li
Hu, Xiaojing
Zhang, Wanping
author_sort Yang, Xuelian
collection PubMed
description Rubus rosifolius belongs to the genus Rubus in the family Rosaceae and is widely distributed globally. It has white flowers and red fruits. Moreover, it has medicinal value for diseases of the stomach and other areas. However, the complete chloroplast (cp) genome of R. rosifolius remains unclear. In the present study, we sequenced the complete cp genome of R. rosifolius (GenBank accession no. OL435124), which had a typical quadripartite structure and a size of 155,650 bp. Fifteen genes (trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC, and ndhA) contained an intron, and two genes (clpP and ycf3) contained two introns. The gene rps12 showed trans-splicing. Phylogenetic analysis showed that R. rosifolius was closely related to Rubus taiwanicola, Rubus rubroangustifolius, and Rubus glandulosopunctatus.
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spelling pubmed-92977122022-07-21 The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant Yang, Xuelian Wang, Xia Wu, Yongfei Yan, Li Hu, Xiaojing Zhang, Wanping Mitochondrial DNA B Resour Plastome Announcement Rubus rosifolius belongs to the genus Rubus in the family Rosaceae and is widely distributed globally. It has white flowers and red fruits. Moreover, it has medicinal value for diseases of the stomach and other areas. However, the complete chloroplast (cp) genome of R. rosifolius remains unclear. In the present study, we sequenced the complete cp genome of R. rosifolius (GenBank accession no. OL435124), which had a typical quadripartite structure and a size of 155,650 bp. Fifteen genes (trnK-UUU, rps16, trnG-UCC, atpF, rpoC1, trnL-UAA, trnV-UAC, petB, petD, rpl16, rpl2, ndhB, trnI-GAU, trnA-UGC, and ndhA) contained an intron, and two genes (clpP and ycf3) contained two introns. The gene rps12 showed trans-splicing. Phylogenetic analysis showed that R. rosifolius was closely related to Rubus taiwanicola, Rubus rubroangustifolius, and Rubus glandulosopunctatus. Taylor & Francis 2022-07-18 /pmc/articles/PMC9297712/ /pubmed/35874281 http://dx.doi.org/10.1080/23802359.2022.2093669 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Yang, Xuelian
Wang, Xia
Wu, Yongfei
Yan, Li
Hu, Xiaojing
Zhang, Wanping
The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title_full The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title_fullStr The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title_full_unstemmed The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title_short The complete chloroplast genome of Rubus rosifolius (Rosaceae), an ornamental and medicinal plant
title_sort complete chloroplast genome of rubus rosifolius (rosaceae), an ornamental and medicinal plant
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9297712/
https://www.ncbi.nlm.nih.gov/pubmed/35874281
http://dx.doi.org/10.1080/23802359.2022.2093669
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