Cargando…

Modular development enables rapid design of media for alternative hosts

Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new medi...

Descripción completa

Detalles Bibliográficos
Autores principales: Biedermann, Andrew M., Gengaro, Isabella R., Rodriguez‐Aponte, Sergio A., Love, Kerry R., Love, J. Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298315/
https://www.ncbi.nlm.nih.gov/pubmed/34596238
http://dx.doi.org/10.1002/bit.27947
_version_ 1784750677822537728
author Biedermann, Andrew M.
Gengaro, Isabella R.
Rodriguez‐Aponte, Sergio A.
Love, Kerry R.
Love, J. Christopher
author_facet Biedermann, Andrew M.
Gengaro, Isabella R.
Rodriguez‐Aponte, Sergio A.
Love, Kerry R.
Love, J. Christopher
author_sort Biedermann, Andrew M.
collection PubMed
description Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new media can facilitate the adoption of new industrially relevant alternative hosts. Despite manifold existing methods, common approaches for optimization often remain time and labor‐intensive. We present here a novel approach to conventional media blending that leverages stable, simple, concentrated stock solutions to enable rapid improvement of measurable phenotypes of interest. We applied this modular methodology to generate high‐performing media for two phenotypes of interest: biomass accumulation and heterologous protein production, using high‐throughput, milliliter‐scale batch fermentations of Pichia pastoris as a model system. In addition to these examples, we also created a flexible open‐source package for modular blending automation on a low‐cost liquid handling system to facilitate wide use of this method. Our modular blending method enables rapid, flexible media development, requiring minimal labor investment and prior knowledge of the host organism, and should enable developing improved media for other hosts and phenotypes of interest.
format Online
Article
Text
id pubmed-9298315
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-92983152022-07-21 Modular development enables rapid design of media for alternative hosts Biedermann, Andrew M. Gengaro, Isabella R. Rodriguez‐Aponte, Sergio A. Love, Kerry R. Love, J. Christopher Biotechnol Bioeng ARTICLES Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new media can facilitate the adoption of new industrially relevant alternative hosts. Despite manifold existing methods, common approaches for optimization often remain time and labor‐intensive. We present here a novel approach to conventional media blending that leverages stable, simple, concentrated stock solutions to enable rapid improvement of measurable phenotypes of interest. We applied this modular methodology to generate high‐performing media for two phenotypes of interest: biomass accumulation and heterologous protein production, using high‐throughput, milliliter‐scale batch fermentations of Pichia pastoris as a model system. In addition to these examples, we also created a flexible open‐source package for modular blending automation on a low‐cost liquid handling system to facilitate wide use of this method. Our modular blending method enables rapid, flexible media development, requiring minimal labor investment and prior knowledge of the host organism, and should enable developing improved media for other hosts and phenotypes of interest. John Wiley and Sons Inc. 2021-10-18 2022-01 /pmc/articles/PMC9298315/ /pubmed/34596238 http://dx.doi.org/10.1002/bit.27947 Text en © 2021 The Authors. Biotechnology and Bioengineering published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle ARTICLES
Biedermann, Andrew M.
Gengaro, Isabella R.
Rodriguez‐Aponte, Sergio A.
Love, Kerry R.
Love, J. Christopher
Modular development enables rapid design of media for alternative hosts
title Modular development enables rapid design of media for alternative hosts
title_full Modular development enables rapid design of media for alternative hosts
title_fullStr Modular development enables rapid design of media for alternative hosts
title_full_unstemmed Modular development enables rapid design of media for alternative hosts
title_short Modular development enables rapid design of media for alternative hosts
title_sort modular development enables rapid design of media for alternative hosts
topic ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298315/
https://www.ncbi.nlm.nih.gov/pubmed/34596238
http://dx.doi.org/10.1002/bit.27947
work_keys_str_mv AT biedermannandrewm modulardevelopmentenablesrapiddesignofmediaforalternativehosts
AT gengaroisabellar modulardevelopmentenablesrapiddesignofmediaforalternativehosts
AT rodriguezapontesergioa modulardevelopmentenablesrapiddesignofmediaforalternativehosts
AT lovekerryr modulardevelopmentenablesrapiddesignofmediaforalternativehosts
AT lovejchristopher modulardevelopmentenablesrapiddesignofmediaforalternativehosts