Cargando…
Modular development enables rapid design of media for alternative hosts
Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new medi...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298315/ https://www.ncbi.nlm.nih.gov/pubmed/34596238 http://dx.doi.org/10.1002/bit.27947 |
_version_ | 1784750677822537728 |
---|---|
author | Biedermann, Andrew M. Gengaro, Isabella R. Rodriguez‐Aponte, Sergio A. Love, Kerry R. Love, J. Christopher |
author_facet | Biedermann, Andrew M. Gengaro, Isabella R. Rodriguez‐Aponte, Sergio A. Love, Kerry R. Love, J. Christopher |
author_sort | Biedermann, Andrew M. |
collection | PubMed |
description | Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new media can facilitate the adoption of new industrially relevant alternative hosts. Despite manifold existing methods, common approaches for optimization often remain time and labor‐intensive. We present here a novel approach to conventional media blending that leverages stable, simple, concentrated stock solutions to enable rapid improvement of measurable phenotypes of interest. We applied this modular methodology to generate high‐performing media for two phenotypes of interest: biomass accumulation and heterologous protein production, using high‐throughput, milliliter‐scale batch fermentations of Pichia pastoris as a model system. In addition to these examples, we also created a flexible open‐source package for modular blending automation on a low‐cost liquid handling system to facilitate wide use of this method. Our modular blending method enables rapid, flexible media development, requiring minimal labor investment and prior knowledge of the host organism, and should enable developing improved media for other hosts and phenotypes of interest. |
format | Online Article Text |
id | pubmed-9298315 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92983152022-07-21 Modular development enables rapid design of media for alternative hosts Biedermann, Andrew M. Gengaro, Isabella R. Rodriguez‐Aponte, Sergio A. Love, Kerry R. Love, J. Christopher Biotechnol Bioeng ARTICLES Developing media to sustain cell growth and production is an essential and ongoing activity in bioprocess development. Modifications to media can often address host or product‐specific challenges, such as low productivity or poor product quality. For other applications, systematic design of new media can facilitate the adoption of new industrially relevant alternative hosts. Despite manifold existing methods, common approaches for optimization often remain time and labor‐intensive. We present here a novel approach to conventional media blending that leverages stable, simple, concentrated stock solutions to enable rapid improvement of measurable phenotypes of interest. We applied this modular methodology to generate high‐performing media for two phenotypes of interest: biomass accumulation and heterologous protein production, using high‐throughput, milliliter‐scale batch fermentations of Pichia pastoris as a model system. In addition to these examples, we also created a flexible open‐source package for modular blending automation on a low‐cost liquid handling system to facilitate wide use of this method. Our modular blending method enables rapid, flexible media development, requiring minimal labor investment and prior knowledge of the host organism, and should enable developing improved media for other hosts and phenotypes of interest. John Wiley and Sons Inc. 2021-10-18 2022-01 /pmc/articles/PMC9298315/ /pubmed/34596238 http://dx.doi.org/10.1002/bit.27947 Text en © 2021 The Authors. Biotechnology and Bioengineering published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | ARTICLES Biedermann, Andrew M. Gengaro, Isabella R. Rodriguez‐Aponte, Sergio A. Love, Kerry R. Love, J. Christopher Modular development enables rapid design of media for alternative hosts |
title | Modular development enables rapid design of media for alternative hosts |
title_full | Modular development enables rapid design of media for alternative hosts |
title_fullStr | Modular development enables rapid design of media for alternative hosts |
title_full_unstemmed | Modular development enables rapid design of media for alternative hosts |
title_short | Modular development enables rapid design of media for alternative hosts |
title_sort | modular development enables rapid design of media for alternative hosts |
topic | ARTICLES |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298315/ https://www.ncbi.nlm.nih.gov/pubmed/34596238 http://dx.doi.org/10.1002/bit.27947 |
work_keys_str_mv | AT biedermannandrewm modulardevelopmentenablesrapiddesignofmediaforalternativehosts AT gengaroisabellar modulardevelopmentenablesrapiddesignofmediaforalternativehosts AT rodriguezapontesergioa modulardevelopmentenablesrapiddesignofmediaforalternativehosts AT lovekerryr modulardevelopmentenablesrapiddesignofmediaforalternativehosts AT lovejchristopher modulardevelopmentenablesrapiddesignofmediaforalternativehosts |