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Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance
Identifying transmission of hot spots with temporal trends is important for reducing infectious disease propagation. Cluster analysis is a particularly useful tool to explore underlying stochastic processes between observations by grouping items into categories by their similarity. In a study of epi...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298438/ https://www.ncbi.nlm.nih.gov/pubmed/34964513 http://dx.doi.org/10.1002/sim.9227 |
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author | Lin, Pei‐Sheng |
author_facet | Lin, Pei‐Sheng |
author_sort | Lin, Pei‐Sheng |
collection | PubMed |
description | Identifying transmission of hot spots with temporal trends is important for reducing infectious disease propagation. Cluster analysis is a particularly useful tool to explore underlying stochastic processes between observations by grouping items into categories by their similarity. In a study of epidemic propagation, clustering geographic regions that have similar time series could help researchers track diffusion routes from a common source of an infectious disease. In this article, we propose a two‐stage scan statistic to classify regions into various geographic clusters by their temporal heterogeneity. The proposed scan statistic is more flexible than traditional methods in that contiguous and nonproximate regions with similar temporal patterns can be identified simultaneously. A simulation study and data analysis for a dengue fever infection are also presented for illustration. |
format | Online Article Text |
id | pubmed-9298438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92984382022-07-21 Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance Lin, Pei‐Sheng Stat Med Research Articles Identifying transmission of hot spots with temporal trends is important for reducing infectious disease propagation. Cluster analysis is a particularly useful tool to explore underlying stochastic processes between observations by grouping items into categories by their similarity. In a study of epidemic propagation, clustering geographic regions that have similar time series could help researchers track diffusion routes from a common source of an infectious disease. In this article, we propose a two‐stage scan statistic to classify regions into various geographic clusters by their temporal heterogeneity. The proposed scan statistic is more flexible than traditional methods in that contiguous and nonproximate regions with similar temporal patterns can be identified simultaneously. A simulation study and data analysis for a dengue fever infection are also presented for illustration. John Wiley and Sons Inc. 2021-10-20 2022-01-15 /pmc/articles/PMC9298438/ /pubmed/34964513 http://dx.doi.org/10.1002/sim.9227 Text en © 2021 The Author. Statistics in Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles Lin, Pei‐Sheng Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title | Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title_full | Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title_fullStr | Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title_full_unstemmed | Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title_short | Identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
title_sort | identification of geographic clusters for temporal heterogeneity with application to dengue surveillance |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298438/ https://www.ncbi.nlm.nih.gov/pubmed/34964513 http://dx.doi.org/10.1002/sim.9227 |
work_keys_str_mv | AT linpeisheng identificationofgeographicclustersfortemporalheterogeneitywithapplicationtodenguesurveillance |