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Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas
BACKGROUND: Several studies have suggested that anti-silencing function 1 B (ASF1B) can serve as a good potential marker for predicting tumor prognosis. But the values of ASF1B in gliomas have not been elucidated and further confirmation is needed. METHODS: Transcriptomic and clinical data were down...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298524/ https://www.ncbi.nlm.nih.gov/pubmed/35875094 http://dx.doi.org/10.3389/fonc.2022.912101 |
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author | Zhu, Huaxin Ouyang, Hengyang Pan, Xinyi Zhang, Zhixiong Tan, Jiacong Yu, Nianzu Li, Meihua Zhao, Yeyu |
author_facet | Zhu, Huaxin Ouyang, Hengyang Pan, Xinyi Zhang, Zhixiong Tan, Jiacong Yu, Nianzu Li, Meihua Zhao, Yeyu |
author_sort | Zhu, Huaxin |
collection | PubMed |
description | BACKGROUND: Several studies have suggested that anti-silencing function 1 B (ASF1B) can serve as a good potential marker for predicting tumor prognosis. But the values of ASF1B in gliomas have not been elucidated and further confirmation is needed. METHODS: Transcriptomic and clinical data were downloaded from The Cancer Genome Atlas database (TCGA), genotypic tissue expression (GTEx), and the Chinese Gliomas Genome Atlas database (CGGA). Univariate and multivariate Cox regression analyses were used to investigate the link between clinical variables and ASF1B. Survival analysis was used to assess the association between ASF1B expression and overall survival (OS). The relationship between ASF1B expression and OS was studied using survival analysis. To investigate the probable function and immunological infiltration, researchers used gene ontology (GO) analysis, gene set enrichment analysis (GSEA), and single-sample GSEA (ssGSEA). RESULTS: In glioma tissues, ASF1B expression was considerably higher than in normal tissues. The survival analysis found that increased ASF1B expression was linked with a poor prognosis in glioma patients. ASF1B demonstrated a high diagnostic value in glioma patients, according to a Receiver Operating Characteristic (ROC) analysis. ASF1B was found to be an independent predictive factor for OS in a Cox regression study (HR = 1.573, 95% CI: 1.053–2.350, p = 0.027). GO, KEGG, and GSEA functional enrichment analysis revealed that ASF1B was associated with nuclear division, cell cycle, m-phase, and cell cycle checkpoints. Immuno-infiltration analysis revealed that ASF1B was positively related to Th2 cells, macrophages, and aDC and was negatively related to pDC, TFH, and NK CD56 bright cells. CONCLUSION: A high level of ASF1B mRNA expression was correlated with a poor prognosis in glioma patients in this study, implying that it could be a reliable prognostic biomarker for glioma patients. |
format | Online Article Text |
id | pubmed-9298524 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92985242022-07-21 Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas Zhu, Huaxin Ouyang, Hengyang Pan, Xinyi Zhang, Zhixiong Tan, Jiacong Yu, Nianzu Li, Meihua Zhao, Yeyu Front Oncol Oncology BACKGROUND: Several studies have suggested that anti-silencing function 1 B (ASF1B) can serve as a good potential marker for predicting tumor prognosis. But the values of ASF1B in gliomas have not been elucidated and further confirmation is needed. METHODS: Transcriptomic and clinical data were downloaded from The Cancer Genome Atlas database (TCGA), genotypic tissue expression (GTEx), and the Chinese Gliomas Genome Atlas database (CGGA). Univariate and multivariate Cox regression analyses were used to investigate the link between clinical variables and ASF1B. Survival analysis was used to assess the association between ASF1B expression and overall survival (OS). The relationship between ASF1B expression and OS was studied using survival analysis. To investigate the probable function and immunological infiltration, researchers used gene ontology (GO) analysis, gene set enrichment analysis (GSEA), and single-sample GSEA (ssGSEA). RESULTS: In glioma tissues, ASF1B expression was considerably higher than in normal tissues. The survival analysis found that increased ASF1B expression was linked with a poor prognosis in glioma patients. ASF1B demonstrated a high diagnostic value in glioma patients, according to a Receiver Operating Characteristic (ROC) analysis. ASF1B was found to be an independent predictive factor for OS in a Cox regression study (HR = 1.573, 95% CI: 1.053–2.350, p = 0.027). GO, KEGG, and GSEA functional enrichment analysis revealed that ASF1B was associated with nuclear division, cell cycle, m-phase, and cell cycle checkpoints. Immuno-infiltration analysis revealed that ASF1B was positively related to Th2 cells, macrophages, and aDC and was negatively related to pDC, TFH, and NK CD56 bright cells. CONCLUSION: A high level of ASF1B mRNA expression was correlated with a poor prognosis in glioma patients in this study, implying that it could be a reliable prognostic biomarker for glioma patients. Frontiers Media S.A. 2022-07-06 /pmc/articles/PMC9298524/ /pubmed/35875094 http://dx.doi.org/10.3389/fonc.2022.912101 Text en Copyright © 2022 Zhu, Ouyang, Pan, Zhang, Tan, Yu, Li and Zhao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zhu, Huaxin Ouyang, Hengyang Pan, Xinyi Zhang, Zhixiong Tan, Jiacong Yu, Nianzu Li, Meihua Zhao, Yeyu Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title | Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title_full | Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title_fullStr | Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title_full_unstemmed | Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title_short | Increased ASF1B Expression Correlates With Poor Prognosis in Patients With Gliomas |
title_sort | increased asf1b expression correlates with poor prognosis in patients with gliomas |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9298524/ https://www.ncbi.nlm.nih.gov/pubmed/35875094 http://dx.doi.org/10.3389/fonc.2022.912101 |
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