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Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates

The ability of RNA to catalyze RNA ligation is critical to its central role in many prebiotic model scenarios, in particular the copying of information during self‐replication. Prebiotically plausible ribozymes formed from short oligonucleotides can catalyze reversible RNA cleavage and ligation reac...

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Autores principales: Le Vay, Kristian, Song, Emilie Yeonwha, Ghosh, Basusree, Tang, T.‐Y. Dora, Mutschler, Hannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9299051/
https://www.ncbi.nlm.nih.gov/pubmed/34569680
http://dx.doi.org/10.1002/anie.202109267
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author Le Vay, Kristian
Song, Emilie Yeonwha
Ghosh, Basusree
Tang, T.‐Y. Dora
Mutschler, Hannes
author_facet Le Vay, Kristian
Song, Emilie Yeonwha
Ghosh, Basusree
Tang, T.‐Y. Dora
Mutschler, Hannes
author_sort Le Vay, Kristian
collection PubMed
description The ability of RNA to catalyze RNA ligation is critical to its central role in many prebiotic model scenarios, in particular the copying of information during self‐replication. Prebiotically plausible ribozymes formed from short oligonucleotides can catalyze reversible RNA cleavage and ligation reactions, but harsh conditions or unusual scenarios are often required to promote folding and drive the reaction equilibrium towards ligation. Here, we demonstrate that ribozyme activity is greatly enhanced by charge‐mediated phase separation with poly‐L‐lysine, which shifts the reaction equilibrium from cleavage in solution to ligation in peptide‐RNA coaggregates and coacervates. This compartmentalization enables robust isothermal RNA assembly over a broad range of conditions, which can be leveraged to assemble long and complex RNAs from short fragments under mild conditions in the absence of exogenous activation chemistry, bridging the gap between pools of short oligomers and functional RNAs.
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spelling pubmed-92990512022-07-21 Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates Le Vay, Kristian Song, Emilie Yeonwha Ghosh, Basusree Tang, T.‐Y. Dora Mutschler, Hannes Angew Chem Int Ed Engl Research Articles The ability of RNA to catalyze RNA ligation is critical to its central role in many prebiotic model scenarios, in particular the copying of information during self‐replication. Prebiotically plausible ribozymes formed from short oligonucleotides can catalyze reversible RNA cleavage and ligation reactions, but harsh conditions or unusual scenarios are often required to promote folding and drive the reaction equilibrium towards ligation. Here, we demonstrate that ribozyme activity is greatly enhanced by charge‐mediated phase separation with poly‐L‐lysine, which shifts the reaction equilibrium from cleavage in solution to ligation in peptide‐RNA coaggregates and coacervates. This compartmentalization enables robust isothermal RNA assembly over a broad range of conditions, which can be leveraged to assemble long and complex RNAs from short fragments under mild conditions in the absence of exogenous activation chemistry, bridging the gap between pools of short oligomers and functional RNAs. John Wiley and Sons Inc. 2021-11-09 2021-12-06 /pmc/articles/PMC9299051/ /pubmed/34569680 http://dx.doi.org/10.1002/anie.202109267 Text en © 2021 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Le Vay, Kristian
Song, Emilie Yeonwha
Ghosh, Basusree
Tang, T.‐Y. Dora
Mutschler, Hannes
Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title_full Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title_fullStr Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title_full_unstemmed Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title_short Enhanced Ribozyme‐Catalyzed Recombination and Oligonucleotide Assembly in Peptide‐RNA Condensates
title_sort enhanced ribozyme‐catalyzed recombination and oligonucleotide assembly in peptide‐rna condensates
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9299051/
https://www.ncbi.nlm.nih.gov/pubmed/34569680
http://dx.doi.org/10.1002/anie.202109267
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