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Machine Learning-Based Models Enhance the Prediction of Prostate Cancer
PURPOSE: PSA is currently the most commonly used screening indicator for prostate cancer. However, it has limited specificity for the diagnosis of prostate cancer. We aim to construct machine learning-based models and enhance the prediction of prostate cancer. METHODS: The data of 551 patients who u...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9299367/ https://www.ncbi.nlm.nih.gov/pubmed/35875103 http://dx.doi.org/10.3389/fonc.2022.941349 |
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author | Chen, Sunmeng Jian, Tengteng Chi, Changliang Liang, Yi Liang, Xiao Yu, Ying Jiang, Fengming Lu, Ji |
author_facet | Chen, Sunmeng Jian, Tengteng Chi, Changliang Liang, Yi Liang, Xiao Yu, Ying Jiang, Fengming Lu, Ji |
author_sort | Chen, Sunmeng |
collection | PubMed |
description | PURPOSE: PSA is currently the most commonly used screening indicator for prostate cancer. However, it has limited specificity for the diagnosis of prostate cancer. We aim to construct machine learning-based models and enhance the prediction of prostate cancer. METHODS: The data of 551 patients who underwent prostate biopsy were retrospectively retrieved and divided into training and test datasets in a 3:1 ratio. We constructed five PCa prediction models with four supervised machine learning algorithms, including tPSA univariate logistic regression (LR), multivariate LR, decision tree (DT), random forest (RF), and support vector machine (SVM). The five prediction models were compared based on model performance metrics, such as the area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, specificity, calibration curve, and clinical decision curve analysis (DCA). RESULTS: All five models had good calibration in the training dataset. In the training dataset, the RF, DT, and multivariate LR models showed better discrimination, with AUCs of 1.0, 0.922 and 0.91, respectively, than the tPSA univariate LR and SVM models. In the test dataset, the multivariate LR model exhibited the best discrimination (AUC=0.918). The multivariate LR model and SVM model had better extrapolation and generalizability, with little change in performance between the training and test datasets. Compared with the DCA curves of the tPSA LR model, the other four models exhibited better net clinical benefits. CONCLUSION: The results of the current retrospective study suggest that machine learning techniques can predict prostate cancer with significantly better AUC, accuracy, and net clinical benefits. |
format | Online Article Text |
id | pubmed-9299367 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-92993672022-07-21 Machine Learning-Based Models Enhance the Prediction of Prostate Cancer Chen, Sunmeng Jian, Tengteng Chi, Changliang Liang, Yi Liang, Xiao Yu, Ying Jiang, Fengming Lu, Ji Front Oncol Oncology PURPOSE: PSA is currently the most commonly used screening indicator for prostate cancer. However, it has limited specificity for the diagnosis of prostate cancer. We aim to construct machine learning-based models and enhance the prediction of prostate cancer. METHODS: The data of 551 patients who underwent prostate biopsy were retrospectively retrieved and divided into training and test datasets in a 3:1 ratio. We constructed five PCa prediction models with four supervised machine learning algorithms, including tPSA univariate logistic regression (LR), multivariate LR, decision tree (DT), random forest (RF), and support vector machine (SVM). The five prediction models were compared based on model performance metrics, such as the area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, specificity, calibration curve, and clinical decision curve analysis (DCA). RESULTS: All five models had good calibration in the training dataset. In the training dataset, the RF, DT, and multivariate LR models showed better discrimination, with AUCs of 1.0, 0.922 and 0.91, respectively, than the tPSA univariate LR and SVM models. In the test dataset, the multivariate LR model exhibited the best discrimination (AUC=0.918). The multivariate LR model and SVM model had better extrapolation and generalizability, with little change in performance between the training and test datasets. Compared with the DCA curves of the tPSA LR model, the other four models exhibited better net clinical benefits. CONCLUSION: The results of the current retrospective study suggest that machine learning techniques can predict prostate cancer with significantly better AUC, accuracy, and net clinical benefits. Frontiers Media S.A. 2022-07-06 /pmc/articles/PMC9299367/ /pubmed/35875103 http://dx.doi.org/10.3389/fonc.2022.941349 Text en Copyright © 2022 Chen, Jian, Chi, Liang, Liang, Yu, Jiang and Lu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Chen, Sunmeng Jian, Tengteng Chi, Changliang Liang, Yi Liang, Xiao Yu, Ying Jiang, Fengming Lu, Ji Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title | Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title_full | Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title_fullStr | Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title_full_unstemmed | Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title_short | Machine Learning-Based Models Enhance the Prediction of Prostate Cancer |
title_sort | machine learning-based models enhance the prediction of prostate cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9299367/ https://www.ncbi.nlm.nih.gov/pubmed/35875103 http://dx.doi.org/10.3389/fonc.2022.941349 |
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