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Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology
DNA sequences were analyzed for three groups of species from the Lepocinclis genus (L. acus‐like, L. oxyuris‐like, and L. tripteris‐like) along with cellular morphology. Phylogenetic analyses were based on nuclear SSU rDNA, LSU rDNA, and plastid‐encoded LSU rDNA. DNA sequences were obtained from spe...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300208/ https://www.ncbi.nlm.nih.gov/pubmed/34719033 http://dx.doi.org/10.1111/jpy.13220 |
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author | Chaber, Katarzyna Łukomska‐Kowalczyk, Maja Fells, Alicja Milanowski, Rafał Zakryś, Bożena |
author_facet | Chaber, Katarzyna Łukomska‐Kowalczyk, Maja Fells, Alicja Milanowski, Rafał Zakryś, Bożena |
author_sort | Chaber, Katarzyna |
collection | PubMed |
description | DNA sequences were analyzed for three groups of species from the Lepocinclis genus (L. acus‐like, L. oxyuris‐like, and L. tripteris‐like) along with cellular morphology. Phylogenetic analyses were based on nuclear SSU rDNA, LSU rDNA, and plastid‐encoded LSU rDNA. DNA sequences were obtained from species available in culture collections (L. acus SAG 1224‐1a and UTEX 1316) and those isolated directly from the environment in Poland (48 isolates), resulting in 79 new sequences. The obtained phylogenetic tree of Lepocinclis included 27 taxa, five of which are presented for the first time (L. convoluta, L. gracillimoides, L. longissima, L. pseudospiroides, and L. torta) and nine taxonomically verified and described. Based on morphology, literature data, and phylogenetic analyses, the following species were distinguished: in the L. acus‐like group, L. longissima and L. acus; in the L. tripteris‐like group, L. pseudospiroides, L. torta, and L. tripteris; in the L. oxyuris‐like group, L. gracillimoides, L. oxyuris var. oxyuris, and L. oxyuris var. helicoidea. For all verified species, diagnostic descriptions were emended, nomenclatural adjustments were made, and epitypes were designated. |
format | Online Article Text |
id | pubmed-9300208 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93002082022-07-21 Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology Chaber, Katarzyna Łukomska‐Kowalczyk, Maja Fells, Alicja Milanowski, Rafał Zakryś, Bożena J Phycol Research Articles DNA sequences were analyzed for three groups of species from the Lepocinclis genus (L. acus‐like, L. oxyuris‐like, and L. tripteris‐like) along with cellular morphology. Phylogenetic analyses were based on nuclear SSU rDNA, LSU rDNA, and plastid‐encoded LSU rDNA. DNA sequences were obtained from species available in culture collections (L. acus SAG 1224‐1a and UTEX 1316) and those isolated directly from the environment in Poland (48 isolates), resulting in 79 new sequences. The obtained phylogenetic tree of Lepocinclis included 27 taxa, five of which are presented for the first time (L. convoluta, L. gracillimoides, L. longissima, L. pseudospiroides, and L. torta) and nine taxonomically verified and described. Based on morphology, literature data, and phylogenetic analyses, the following species were distinguished: in the L. acus‐like group, L. longissima and L. acus; in the L. tripteris‐like group, L. pseudospiroides, L. torta, and L. tripteris; in the L. oxyuris‐like group, L. gracillimoides, L. oxyuris var. oxyuris, and L. oxyuris var. helicoidea. For all verified species, diagnostic descriptions were emended, nomenclatural adjustments were made, and epitypes were designated. John Wiley and Sons Inc. 2021-12-06 2022-02 /pmc/articles/PMC9300208/ /pubmed/34719033 http://dx.doi.org/10.1111/jpy.13220 Text en © 2021 The Authors. Journal of Phycology published by Wiley Periodicals LLC on behalf of Phycological Society of America https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles Chaber, Katarzyna Łukomska‐Kowalczyk, Maja Fells, Alicja Milanowski, Rafał Zakryś, Bożena Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title | Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title_full | Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title_fullStr | Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title_full_unstemmed | Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title_short | Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology |
title_sort | toward the robust resolution of taxonomic ambiguity within lepocinclis (euglenida) based on dna sequencing and morphology |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300208/ https://www.ncbi.nlm.nih.gov/pubmed/34719033 http://dx.doi.org/10.1111/jpy.13220 |
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