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Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans

Strains Marseille-P3761 and Marseille-P3195 are representatives of two bacterial species isolated from human specimens. Strain Marseille-P3761 was isolated from the stool of a healthy volunteer, while strain Marseille-P3915 was cultivated from the urine of a kidney transplant recipient. Both strains...

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Autores principales: Mbaye, Babacar, Lo, Cheikh Ibrahima, Dione, Niokhor, Benabdelkader, Sarah, Tidjani Alou, Maryam, Brahimi, Samy, Armstrong, Nicholas, Alibar, Stéphane, Raoult, Didier, Moal, Valérie, Million, Matthieu, Fournier, Pierre-Edouard, Fenollar, Florence
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300514/
https://www.ncbi.nlm.nih.gov/pubmed/35857142
http://dx.doi.org/10.1007/s00203-022-03044-z
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author Mbaye, Babacar
Lo, Cheikh Ibrahima
Dione, Niokhor
Benabdelkader, Sarah
Tidjani Alou, Maryam
Brahimi, Samy
Armstrong, Nicholas
Alibar, Stéphane
Raoult, Didier
Moal, Valérie
Million, Matthieu
Fournier, Pierre-Edouard
Fenollar, Florence
author_facet Mbaye, Babacar
Lo, Cheikh Ibrahima
Dione, Niokhor
Benabdelkader, Sarah
Tidjani Alou, Maryam
Brahimi, Samy
Armstrong, Nicholas
Alibar, Stéphane
Raoult, Didier
Moal, Valérie
Million, Matthieu
Fournier, Pierre-Edouard
Fenollar, Florence
author_sort Mbaye, Babacar
collection PubMed
description Strains Marseille-P3761 and Marseille-P3195 are representatives of two bacterial species isolated from human specimens. Strain Marseille-P3761 was isolated from the stool of a healthy volunteer, while strain Marseille-P3915 was cultivated from the urine of a kidney transplant recipient. Both strains are anaerobic Gram-positive coccoid bacteria. Both are catalase-negative and oxidase-negative and grow optimally at 37 °C in anaerobic conditions. They also metabolize carbohydrates, such as galactose, glucose, fructose, and glycerol. The major fatty acids were hexadecanoic acid for both strains. The highest digital DNA–DNA hybridization (dDDH) values of Marseille-P3761 and Marseille-P3195 strains when compared to their closest phylogenetic relatives were 52.3% and 56.4%, respectively. Strains Marseille-P3761 and Marseille-P3195 shared an OrthoANI value of 83.5% which was the highest value found with Peptoniphilus species studied here. The morphological, biochemical, phenotypic and genomic characteristics strongly support that these strains are new members of the Peptoniphilus genus. Thus, we suggest that Peptoniphilus coli sp. nov., and Peptoniphilus urinae sp. nov., are new species for which strains Marseille-P3761 (CSUR P3761 = CCUG 71,569) and Marseille-P3195 (CSUR P3195 = DSM 103,468) are their type strains, respectively of two new Peptoniphilus species, for which we propose the names Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., respectively. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00203-022-03044-z.
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spelling pubmed-93005142022-07-22 Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans Mbaye, Babacar Lo, Cheikh Ibrahima Dione, Niokhor Benabdelkader, Sarah Tidjani Alou, Maryam Brahimi, Samy Armstrong, Nicholas Alibar, Stéphane Raoult, Didier Moal, Valérie Million, Matthieu Fournier, Pierre-Edouard Fenollar, Florence Arch Microbiol Original Paper Strains Marseille-P3761 and Marseille-P3195 are representatives of two bacterial species isolated from human specimens. Strain Marseille-P3761 was isolated from the stool of a healthy volunteer, while strain Marseille-P3915 was cultivated from the urine of a kidney transplant recipient. Both strains are anaerobic Gram-positive coccoid bacteria. Both are catalase-negative and oxidase-negative and grow optimally at 37 °C in anaerobic conditions. They also metabolize carbohydrates, such as galactose, glucose, fructose, and glycerol. The major fatty acids were hexadecanoic acid for both strains. The highest digital DNA–DNA hybridization (dDDH) values of Marseille-P3761 and Marseille-P3195 strains when compared to their closest phylogenetic relatives were 52.3% and 56.4%, respectively. Strains Marseille-P3761 and Marseille-P3195 shared an OrthoANI value of 83.5% which was the highest value found with Peptoniphilus species studied here. The morphological, biochemical, phenotypic and genomic characteristics strongly support that these strains are new members of the Peptoniphilus genus. Thus, we suggest that Peptoniphilus coli sp. nov., and Peptoniphilus urinae sp. nov., are new species for which strains Marseille-P3761 (CSUR P3761 = CCUG 71,569) and Marseille-P3195 (CSUR P3195 = DSM 103,468) are their type strains, respectively of two new Peptoniphilus species, for which we propose the names Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., respectively. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00203-022-03044-z. Springer Berlin Heidelberg 2022-07-20 2022 /pmc/articles/PMC9300514/ /pubmed/35857142 http://dx.doi.org/10.1007/s00203-022-03044-z Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Paper
Mbaye, Babacar
Lo, Cheikh Ibrahima
Dione, Niokhor
Benabdelkader, Sarah
Tidjani Alou, Maryam
Brahimi, Samy
Armstrong, Nicholas
Alibar, Stéphane
Raoult, Didier
Moal, Valérie
Million, Matthieu
Fournier, Pierre-Edouard
Fenollar, Florence
Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title_full Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title_fullStr Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title_full_unstemmed Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title_short Peptoniphilus coli sp. nov. and Peptoniphilus urinae sp. nov., isolated from humans
title_sort peptoniphilus coli sp. nov. and peptoniphilus urinae sp. nov., isolated from humans
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300514/
https://www.ncbi.nlm.nih.gov/pubmed/35857142
http://dx.doi.org/10.1007/s00203-022-03044-z
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