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Learning Causal Effects From Observational Data in Healthcare: A Review and Summary

Causal inference is a broad field that seeks to build and apply models that learn the effect of interventions on outcomes using many data types. While the field has existed for decades, its potential to impact healthcare outcomes has increased dramatically recently due to both advancements in machin...

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Autores principales: Shi, Jingpu, Norgeot, Beau
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300826/
https://www.ncbi.nlm.nih.gov/pubmed/35872797
http://dx.doi.org/10.3389/fmed.2022.864882
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author Shi, Jingpu
Norgeot, Beau
author_facet Shi, Jingpu
Norgeot, Beau
author_sort Shi, Jingpu
collection PubMed
description Causal inference is a broad field that seeks to build and apply models that learn the effect of interventions on outcomes using many data types. While the field has existed for decades, its potential to impact healthcare outcomes has increased dramatically recently due to both advancements in machine learning and the unprecedented amounts of observational data resulting from electronic capture of patient claims data by medical insurance companies and widespread adoption of electronic health records (EHR) worldwide. However, there are many different schools of learning causality coming from different fields of statistics, some of them strongly conflicting. While the recent advances in machine learning greatly enhanced causal inference from a modeling perspective, it further exacerbated the fractured state in this field. This fractured state has limited research at the intersection of causal inference, modern machine learning, and EHRs that could potentially transform healthcare. In this paper we unify the classical causal inference approaches with new machine learning developments into a straightforward framework based on whether the researcher is most interested in finding the best intervention for an individual, a group of similar people, or an entire population. Through this lens, we then provide a timely review of the applications of causal inference in healthcare from the literature. As expected, we found that applications of causal inference in medicine were mostly limited to just a few technique types and lag behind other domains. In light of this gap, we offer a helpful schematic to guide data scientists and healthcare stakeholders in selecting appropriate causal methods and reviewing the findings generated by them.
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spelling pubmed-93008262022-07-22 Learning Causal Effects From Observational Data in Healthcare: A Review and Summary Shi, Jingpu Norgeot, Beau Front Med (Lausanne) Medicine Causal inference is a broad field that seeks to build and apply models that learn the effect of interventions on outcomes using many data types. While the field has existed for decades, its potential to impact healthcare outcomes has increased dramatically recently due to both advancements in machine learning and the unprecedented amounts of observational data resulting from electronic capture of patient claims data by medical insurance companies and widespread adoption of electronic health records (EHR) worldwide. However, there are many different schools of learning causality coming from different fields of statistics, some of them strongly conflicting. While the recent advances in machine learning greatly enhanced causal inference from a modeling perspective, it further exacerbated the fractured state in this field. This fractured state has limited research at the intersection of causal inference, modern machine learning, and EHRs that could potentially transform healthcare. In this paper we unify the classical causal inference approaches with new machine learning developments into a straightforward framework based on whether the researcher is most interested in finding the best intervention for an individual, a group of similar people, or an entire population. Through this lens, we then provide a timely review of the applications of causal inference in healthcare from the literature. As expected, we found that applications of causal inference in medicine were mostly limited to just a few technique types and lag behind other domains. In light of this gap, we offer a helpful schematic to guide data scientists and healthcare stakeholders in selecting appropriate causal methods and reviewing the findings generated by them. Frontiers Media S.A. 2022-07-07 /pmc/articles/PMC9300826/ /pubmed/35872797 http://dx.doi.org/10.3389/fmed.2022.864882 Text en Copyright © 2022 Shi and Norgeot. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Shi, Jingpu
Norgeot, Beau
Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title_full Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title_fullStr Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title_full_unstemmed Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title_short Learning Causal Effects From Observational Data in Healthcare: A Review and Summary
title_sort learning causal effects from observational data in healthcare: a review and summary
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9300826/
https://www.ncbi.nlm.nih.gov/pubmed/35872797
http://dx.doi.org/10.3389/fmed.2022.864882
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