Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern

We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining...

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Detalles Bibliográficos
Autores principales: Lawal, Opeyemi U., Zhang, Linkang, Parreira, Valeria R., Brown, R. Stephen, Chettleburgh, Charles, Dannah, Nora, Delatolla, Robert, Gilbride, Kimberly A., Graber, Tyson E., Islam, Golam, Knockleby, James, Ma, Sean, McDougall, Hanlan, McKay, R. Michael, Mloszewska, Aleksandra, Oswald, Claire, Servos, Mark, Swinwood-Sky, Megan, Ybazeta, Gustavo, Habash, Marc, Goodridge, Lawrence
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2022
Materias:
Omics Data Sets
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302097/
https://www.ncbi.nlm.nih.gov/pubmed/35638829
http://dx.doi.org/10.1128/mra.00362-22
Descripción
Sumario:We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining mutations occurring in various frequencies were reported in the consensus and subconsensus sequences of the composite samples.

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