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Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern
We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
American Society for Microbiology
2022
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302097/ https://www.ncbi.nlm.nih.gov/pubmed/35638829 http://dx.doi.org/10.1128/mra.00362-22 |
| _version_ | 1784751562474651648 |
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| author | Lawal, Opeyemi U. Zhang, Linkang Parreira, Valeria R. Brown, R. Stephen Chettleburgh, Charles Dannah, Nora Delatolla, Robert Gilbride, Kimberly A. Graber, Tyson E. Islam, Golam Knockleby, James Ma, Sean McDougall, Hanlan McKay, R. Michael Mloszewska, Aleksandra Oswald, Claire Servos, Mark Swinwood-Sky, Megan Ybazeta, Gustavo Habash, Marc Goodridge, Lawrence |
| author_facet | Lawal, Opeyemi U. Zhang, Linkang Parreira, Valeria R. Brown, R. Stephen Chettleburgh, Charles Dannah, Nora Delatolla, Robert Gilbride, Kimberly A. Graber, Tyson E. Islam, Golam Knockleby, James Ma, Sean McDougall, Hanlan McKay, R. Michael Mloszewska, Aleksandra Oswald, Claire Servos, Mark Swinwood-Sky, Megan Ybazeta, Gustavo Habash, Marc Goodridge, Lawrence |
| author_sort | Lawal, Opeyemi U. |
| collection | PubMed |
| description | We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining mutations occurring in various frequencies were reported in the consensus and subconsensus sequences of the composite samples. |
| format | Online Article Text |
| id | pubmed-9302097 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2022 |
| publisher | American Society for Microbiology |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-93020972022-07-22 Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern Lawal, Opeyemi U. Zhang, Linkang Parreira, Valeria R. Brown, R. Stephen Chettleburgh, Charles Dannah, Nora Delatolla, Robert Gilbride, Kimberly A. Graber, Tyson E. Islam, Golam Knockleby, James Ma, Sean McDougall, Hanlan McKay, R. Michael Mloszewska, Aleksandra Oswald, Claire Servos, Mark Swinwood-Sky, Megan Ybazeta, Gustavo Habash, Marc Goodridge, Lawrence Microbiol Resour Announc Omics Data Sets We report metagenomic sequencing analyses of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in composite wastewater influent from 10 regions in Ontario, Canada, during the transition between Delta and Omicron variants of concern. The Delta and Omicron BA.1/BA.1.1 and BA.2-defining mutations occurring in various frequencies were reported in the consensus and subconsensus sequences of the composite samples. American Society for Microbiology 2022-05-31 /pmc/articles/PMC9302097/ /pubmed/35638829 http://dx.doi.org/10.1128/mra.00362-22 Text en © Crown copyright 2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
| spellingShingle | Omics Data Sets Lawal, Opeyemi U. Zhang, Linkang Parreira, Valeria R. Brown, R. Stephen Chettleburgh, Charles Dannah, Nora Delatolla, Robert Gilbride, Kimberly A. Graber, Tyson E. Islam, Golam Knockleby, James Ma, Sean McDougall, Hanlan McKay, R. Michael Mloszewska, Aleksandra Oswald, Claire Servos, Mark Swinwood-Sky, Megan Ybazeta, Gustavo Habash, Marc Goodridge, Lawrence Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title | Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title_full | Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title_fullStr | Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title_full_unstemmed | Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title_short | Metagenomics of Wastewater Influent from Wastewater Treatment Facilities across Ontario in the Era of Emerging SARS-CoV-2 Variants of Concern |
| title_sort | metagenomics of wastewater influent from wastewater treatment facilities across ontario in the era of emerging sars-cov-2 variants of concern |
| topic | Omics Data Sets |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302097/ https://www.ncbi.nlm.nih.gov/pubmed/35638829 http://dx.doi.org/10.1128/mra.00362-22 |
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