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Reference curve sampling variability in one–sample log–rank tests
The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however,...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302761/ https://www.ncbi.nlm.nih.gov/pubmed/35862473 http://dx.doi.org/10.1371/journal.pone.0271094 |
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author | Danzer, Moritz Fabian Feld, Jannik Faldum, Andreas Schmidt, Rene |
author_facet | Danzer, Moritz Fabian Feld, Jannik Faldum, Andreas Schmidt, Rene |
author_sort | Danzer, Moritz Fabian |
collection | PubMed |
description | The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however, assumes that the reference survival curve is known. This ignores that the reference curve is commonly estimated from historic data and thus prone to sampling error. Ignoring sampling variability of the reference curve results in type I error rate inflation. We study this inflation in type I error rate analytically and by simulation. Moreover we derive the actual distribution of the one–sample log–rank test statistic, when the sampling variability of the reference curve is taken into account. In particular, we provide a consistent estimate of the factor by which the true variance of the one-sample log–rank statistic is underestimated when reference curve sampling variability is ignored. Our results are further substantiated by a case study using a real world data example in which we demonstrate how to estimate the error rate inflation in the planning stage of a trial. |
format | Online Article Text |
id | pubmed-9302761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-93027612022-07-22 Reference curve sampling variability in one–sample log–rank tests Danzer, Moritz Fabian Feld, Jannik Faldum, Andreas Schmidt, Rene PLoS One Research Article The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however, assumes that the reference survival curve is known. This ignores that the reference curve is commonly estimated from historic data and thus prone to sampling error. Ignoring sampling variability of the reference curve results in type I error rate inflation. We study this inflation in type I error rate analytically and by simulation. Moreover we derive the actual distribution of the one–sample log–rank test statistic, when the sampling variability of the reference curve is taken into account. In particular, we provide a consistent estimate of the factor by which the true variance of the one-sample log–rank statistic is underestimated when reference curve sampling variability is ignored. Our results are further substantiated by a case study using a real world data example in which we demonstrate how to estimate the error rate inflation in the planning stage of a trial. Public Library of Science 2022-07-21 /pmc/articles/PMC9302761/ /pubmed/35862473 http://dx.doi.org/10.1371/journal.pone.0271094 Text en © 2022 Danzer et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Danzer, Moritz Fabian Feld, Jannik Faldum, Andreas Schmidt, Rene Reference curve sampling variability in one–sample log–rank tests |
title | Reference curve sampling variability in one–sample log–rank tests |
title_full | Reference curve sampling variability in one–sample log–rank tests |
title_fullStr | Reference curve sampling variability in one–sample log–rank tests |
title_full_unstemmed | Reference curve sampling variability in one–sample log–rank tests |
title_short | Reference curve sampling variability in one–sample log–rank tests |
title_sort | reference curve sampling variability in one–sample log–rank tests |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302761/ https://www.ncbi.nlm.nih.gov/pubmed/35862473 http://dx.doi.org/10.1371/journal.pone.0271094 |
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