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Reference curve sampling variability in one–sample log–rank tests

The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however,...

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Detalles Bibliográficos
Autores principales: Danzer, Moritz Fabian, Feld, Jannik, Faldum, Andreas, Schmidt, Rene
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302761/
https://www.ncbi.nlm.nih.gov/pubmed/35862473
http://dx.doi.org/10.1371/journal.pone.0271094
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author Danzer, Moritz Fabian
Feld, Jannik
Faldum, Andreas
Schmidt, Rene
author_facet Danzer, Moritz Fabian
Feld, Jannik
Faldum, Andreas
Schmidt, Rene
author_sort Danzer, Moritz Fabian
collection PubMed
description The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however, assumes that the reference survival curve is known. This ignores that the reference curve is commonly estimated from historic data and thus prone to sampling error. Ignoring sampling variability of the reference curve results in type I error rate inflation. We study this inflation in type I error rate analytically and by simulation. Moreover we derive the actual distribution of the one–sample log–rank test statistic, when the sampling variability of the reference curve is taken into account. In particular, we provide a consistent estimate of the factor by which the true variance of the one-sample log–rank statistic is underestimated when reference curve sampling variability is ignored. Our results are further substantiated by a case study using a real world data example in which we demonstrate how to estimate the error rate inflation in the planning stage of a trial.
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spelling pubmed-93027612022-07-22 Reference curve sampling variability in one–sample log–rank tests Danzer, Moritz Fabian Feld, Jannik Faldum, Andreas Schmidt, Rene PLoS One Research Article The one–sample log–rank test is the method of choice for single–arm Phase II trials with time–to–event endpoint. It allows to compare the survival of patients to a reference survival curve that typically represents the expected survival under standard of care. The one–sample log–rank test, however, assumes that the reference survival curve is known. This ignores that the reference curve is commonly estimated from historic data and thus prone to sampling error. Ignoring sampling variability of the reference curve results in type I error rate inflation. We study this inflation in type I error rate analytically and by simulation. Moreover we derive the actual distribution of the one–sample log–rank test statistic, when the sampling variability of the reference curve is taken into account. In particular, we provide a consistent estimate of the factor by which the true variance of the one-sample log–rank statistic is underestimated when reference curve sampling variability is ignored. Our results are further substantiated by a case study using a real world data example in which we demonstrate how to estimate the error rate inflation in the planning stage of a trial. Public Library of Science 2022-07-21 /pmc/articles/PMC9302761/ /pubmed/35862473 http://dx.doi.org/10.1371/journal.pone.0271094 Text en © 2022 Danzer et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Danzer, Moritz Fabian
Feld, Jannik
Faldum, Andreas
Schmidt, Rene
Reference curve sampling variability in one–sample log–rank tests
title Reference curve sampling variability in one–sample log–rank tests
title_full Reference curve sampling variability in one–sample log–rank tests
title_fullStr Reference curve sampling variability in one–sample log–rank tests
title_full_unstemmed Reference curve sampling variability in one–sample log–rank tests
title_short Reference curve sampling variability in one–sample log–rank tests
title_sort reference curve sampling variability in one–sample log–rank tests
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302761/
https://www.ncbi.nlm.nih.gov/pubmed/35862473
http://dx.doi.org/10.1371/journal.pone.0271094
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