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Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expres...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303125/ https://www.ncbi.nlm.nih.gov/pubmed/35872941 http://dx.doi.org/10.1155/2022/6881600 |
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author | Dong, Yong Miao, Qian Li, Da |
author_facet | Dong, Yong Miao, Qian Li, Da |
author_sort | Dong, Yong |
collection | PubMed |
description | METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expression profiles and clinical data of TCGA-LIHC mRNAs were from TCGA database. We established a prognostic model of HCC through univariate and multivariate Cox risk regression analyses. ROC curve analysis was used to examine the prognostic model performance. GSEA analysis was performed between the high- and low-risk score sample groups. RESULTS: A 4-gene HCC prognostic model was constructed, in which the gene expressions correlated to HCC patients' survival. The AUC value presented 0.734 in the ROC analysis for the prognostic model. CONCLUSION: The four-gene model could be introduced as an independent prognostic factors to assess HCC patients' survival status. |
format | Online Article Text |
id | pubmed-9303125 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-93031252022-07-22 Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis Dong, Yong Miao, Qian Li, Da Comput Math Methods Med Research Article METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expression profiles and clinical data of TCGA-LIHC mRNAs were from TCGA database. We established a prognostic model of HCC through univariate and multivariate Cox risk regression analyses. ROC curve analysis was used to examine the prognostic model performance. GSEA analysis was performed between the high- and low-risk score sample groups. RESULTS: A 4-gene HCC prognostic model was constructed, in which the gene expressions correlated to HCC patients' survival. The AUC value presented 0.734 in the ROC analysis for the prognostic model. CONCLUSION: The four-gene model could be introduced as an independent prognostic factors to assess HCC patients' survival status. Hindawi 2022-07-14 /pmc/articles/PMC9303125/ /pubmed/35872941 http://dx.doi.org/10.1155/2022/6881600 Text en Copyright © 2022 Yong Dong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Dong, Yong Miao, Qian Li, Da Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title | Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title_full | Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title_fullStr | Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title_full_unstemmed | Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title_short | Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis |
title_sort | screening of prognostic markers for hepatocellular carcinoma patients based on multichip combined analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303125/ https://www.ncbi.nlm.nih.gov/pubmed/35872941 http://dx.doi.org/10.1155/2022/6881600 |
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