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Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis

METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expres...

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Detalles Bibliográficos
Autores principales: Dong, Yong, Miao, Qian, Li, Da
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303125/
https://www.ncbi.nlm.nih.gov/pubmed/35872941
http://dx.doi.org/10.1155/2022/6881600
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author Dong, Yong
Miao, Qian
Li, Da
author_facet Dong, Yong
Miao, Qian
Li, Da
author_sort Dong, Yong
collection PubMed
description METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expression profiles and clinical data of TCGA-LIHC mRNAs were from TCGA database. We established a prognostic model of HCC through univariate and multivariate Cox risk regression analyses. ROC curve analysis was used to examine the prognostic model performance. GSEA analysis was performed between the high- and low-risk score sample groups. RESULTS: A 4-gene HCC prognostic model was constructed, in which the gene expressions correlated to HCC patients' survival. The AUC value presented 0.734 in the ROC analysis for the prognostic model. CONCLUSION: The four-gene model could be introduced as an independent prognostic factors to assess HCC patients' survival status.
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spelling pubmed-93031252022-07-22 Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis Dong, Yong Miao, Qian Li, Da Comput Math Methods Med Research Article METHODS: GSE (14520, 36376, 57957, 76427) datasets were accessed from GEO database. 55 differential mRNAs (DEGs) were obtained by differential analysis based on the datasets. GO and KEGG analysis results indicated that the DEGs were enriched in xenobiotic metabolic process and other pathways. Expression profiles and clinical data of TCGA-LIHC mRNAs were from TCGA database. We established a prognostic model of HCC through univariate and multivariate Cox risk regression analyses. ROC curve analysis was used to examine the prognostic model performance. GSEA analysis was performed between the high- and low-risk score sample groups. RESULTS: A 4-gene HCC prognostic model was constructed, in which the gene expressions correlated to HCC patients' survival. The AUC value presented 0.734 in the ROC analysis for the prognostic model. CONCLUSION: The four-gene model could be introduced as an independent prognostic factors to assess HCC patients' survival status. Hindawi 2022-07-14 /pmc/articles/PMC9303125/ /pubmed/35872941 http://dx.doi.org/10.1155/2022/6881600 Text en Copyright © 2022 Yong Dong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Dong, Yong
Miao, Qian
Li, Da
Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title_full Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title_fullStr Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title_full_unstemmed Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title_short Screening of Prognostic Markers for Hepatocellular Carcinoma Patients Based on Multichip Combined Analysis
title_sort screening of prognostic markers for hepatocellular carcinoma patients based on multichip combined analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303125/
https://www.ncbi.nlm.nih.gov/pubmed/35872941
http://dx.doi.org/10.1155/2022/6881600
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