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An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
Due to the presence of both a slightly acidic carbon and a slightly basic oxygen, carbon dioxide is often involved in concerted transition states (TSs) with two (or more) different molecular events interlaced in the same step. The possibility of isolating and quantitatively evaluating each molecular...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303928/ https://www.ncbi.nlm.nih.gov/pubmed/35194805 http://dx.doi.org/10.1002/jcc.26829 |
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author | Sorbelli, Diego Belanzoni, Paola Belpassi, Leonardo Lee, Ji‐Woong Ciancaleoni, Gianluca |
author_facet | Sorbelli, Diego Belanzoni, Paola Belpassi, Leonardo Lee, Ji‐Woong Ciancaleoni, Gianluca |
author_sort | Sorbelli, Diego |
collection | PubMed |
description | Due to the presence of both a slightly acidic carbon and a slightly basic oxygen, carbon dioxide is often involved in concerted transition states (TSs) with two (or more) different molecular events interlaced in the same step. The possibility of isolating and quantitatively evaluating each molecular event would be important to characterize and understand the reaction mechanism in depth. This could be done, in principle, by measuring the relevant distances in the optimized TS, but often distances are not accurate enough, especially in the presence of many simultaneous processes. Here, we have applied the Extended Transition State‐Natural Orbital for Chemical Valence‐method (ETS‐NOCV), also in combination with the Activation Strain Model (ASM) and Energy Decomposition Analysis (EDA), to separate and quantify these molecular events at the TS of both organometallic and organic reactions. For the former, we chose the decomposition of formic acid to CO(2) by an iridium catalyst, and for the latter, a CO(2)‐mediated transamidation and its chemical variations (hydro‐ and aminolysis of an ester) as case studies. We demonstrate that the one‐to‐one mapping between the “molecular events” and the ETS‐NOCV components is maintained along the entire lowest energy path connecting reactants and products around the TS, thus enabling a detailed picture on the relative importance of each interacting component. The methodology proposed here provides valuable insights into the effect of different chemical substituents on the reaction mechanism and promises to be generally applicable for any concerted TSs. |
format | Online Article Text |
id | pubmed-9303928 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93039282022-07-28 An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2) Sorbelli, Diego Belanzoni, Paola Belpassi, Leonardo Lee, Ji‐Woong Ciancaleoni, Gianluca J Comput Chem Research Articles Due to the presence of both a slightly acidic carbon and a slightly basic oxygen, carbon dioxide is often involved in concerted transition states (TSs) with two (or more) different molecular events interlaced in the same step. The possibility of isolating and quantitatively evaluating each molecular event would be important to characterize and understand the reaction mechanism in depth. This could be done, in principle, by measuring the relevant distances in the optimized TS, but often distances are not accurate enough, especially in the presence of many simultaneous processes. Here, we have applied the Extended Transition State‐Natural Orbital for Chemical Valence‐method (ETS‐NOCV), also in combination with the Activation Strain Model (ASM) and Energy Decomposition Analysis (EDA), to separate and quantify these molecular events at the TS of both organometallic and organic reactions. For the former, we chose the decomposition of formic acid to CO(2) by an iridium catalyst, and for the latter, a CO(2)‐mediated transamidation and its chemical variations (hydro‐ and aminolysis of an ester) as case studies. We demonstrate that the one‐to‐one mapping between the “molecular events” and the ETS‐NOCV components is maintained along the entire lowest energy path connecting reactants and products around the TS, thus enabling a detailed picture on the relative importance of each interacting component. The methodology proposed here provides valuable insights into the effect of different chemical substituents on the reaction mechanism and promises to be generally applicable for any concerted TSs. John Wiley & Sons, Inc. 2022-02-23 2022-04-15 /pmc/articles/PMC9303928/ /pubmed/35194805 http://dx.doi.org/10.1002/jcc.26829 Text en © 2022 The Authors. Journal of Computational Chemistry published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Research Articles Sorbelli, Diego Belanzoni, Paola Belpassi, Leonardo Lee, Ji‐Woong Ciancaleoni, Gianluca An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2) |
title | An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
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title_full | An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
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title_fullStr | An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
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title_full_unstemmed | An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
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title_short | An ETS‐NOCV‐based computational strategies for the characterization of concerted transition states involving CO(2)
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title_sort | ets‐nocv‐based computational strategies for the characterization of concerted transition states involving co(2) |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9303928/ https://www.ncbi.nlm.nih.gov/pubmed/35194805 http://dx.doi.org/10.1002/jcc.26829 |
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