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Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery

Efficient drug discovery is based on a concerted effort in optimizing bioactivity and compound properties such as lipophilicity, and is guided by efficiency metrics that reflect both aspects. While conformation–activity relationships and ligand conformational control are known strategies to improve...

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Autores principales: Linclau, Bruno, Wang, Zhong, Jeffries, Benjamin, Graton, Jérôme, Carbajo, Rodrigo J., Sinnaeve, Davy, Le Questel, Jean‐Yves, Scott, James S., Chiarparin, Elisabetta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304282/
https://www.ncbi.nlm.nih.gov/pubmed/34913249
http://dx.doi.org/10.1002/anie.202114862
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author Linclau, Bruno
Wang, Zhong
Jeffries, Benjamin
Graton, Jérôme
Carbajo, Rodrigo J.
Sinnaeve, Davy
Le Questel, Jean‐Yves
Scott, James S.
Chiarparin, Elisabetta
author_facet Linclau, Bruno
Wang, Zhong
Jeffries, Benjamin
Graton, Jérôme
Carbajo, Rodrigo J.
Sinnaeve, Davy
Le Questel, Jean‐Yves
Scott, James S.
Chiarparin, Elisabetta
author_sort Linclau, Bruno
collection PubMed
description Efficient drug discovery is based on a concerted effort in optimizing bioactivity and compound properties such as lipophilicity, and is guided by efficiency metrics that reflect both aspects. While conformation–activity relationships and ligand conformational control are known strategies to improve bioactivity, the use of conformer‐specific lipophilicities (logp) is much less explored. Here we show how conformer‐specific logp values can be obtained from knowledge of the macroscopic logP value, and of the equilibrium constants between the individual species in water and in octanol. This is illustrated with fluorinated amide rotamers, with integration of rotamer (19)F NMR signals as a facile, direct method to obtain logp values. The difference between logp and logP optimization is highlighted, giving rise to a novel avenue for lipophilicity control in drug discovery.
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spelling pubmed-93042822022-07-28 Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery Linclau, Bruno Wang, Zhong Jeffries, Benjamin Graton, Jérôme Carbajo, Rodrigo J. Sinnaeve, Davy Le Questel, Jean‐Yves Scott, James S. Chiarparin, Elisabetta Angew Chem Int Ed Engl Communications Efficient drug discovery is based on a concerted effort in optimizing bioactivity and compound properties such as lipophilicity, and is guided by efficiency metrics that reflect both aspects. While conformation–activity relationships and ligand conformational control are known strategies to improve bioactivity, the use of conformer‐specific lipophilicities (logp) is much less explored. Here we show how conformer‐specific logp values can be obtained from knowledge of the macroscopic logP value, and of the equilibrium constants between the individual species in water and in octanol. This is illustrated with fluorinated amide rotamers, with integration of rotamer (19)F NMR signals as a facile, direct method to obtain logp values. The difference between logp and logP optimization is highlighted, giving rise to a novel avenue for lipophilicity control in drug discovery. John Wiley and Sons Inc. 2021-12-29 2022-02-07 /pmc/articles/PMC9304282/ /pubmed/34913249 http://dx.doi.org/10.1002/anie.202114862 Text en © 2021 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Communications
Linclau, Bruno
Wang, Zhong
Jeffries, Benjamin
Graton, Jérôme
Carbajo, Rodrigo J.
Sinnaeve, Davy
Le Questel, Jean‐Yves
Scott, James S.
Chiarparin, Elisabetta
Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title_full Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title_fullStr Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title_full_unstemmed Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title_short Relating Conformational Equilibria to Conformer‐Specific Lipophilicities: New Opportunities in Drug Discovery
title_sort relating conformational equilibria to conformer‐specific lipophilicities: new opportunities in drug discovery
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304282/
https://www.ncbi.nlm.nih.gov/pubmed/34913249
http://dx.doi.org/10.1002/anie.202114862
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