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Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science
Deep learning techniques have been increasingly applied to the natural sciences, e.g., for property prediction and optimization or material discovery. A fundamental ingredient of such approaches is the vast quantity of labeled data needed to train the model. This poses severe challenges in data-scar...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304370/ https://www.ncbi.nlm.nih.gov/pubmed/35864122 http://dx.doi.org/10.1038/s41467-022-31915-y |
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author | Loh, Charlotte Christensen, Thomas Dangovski, Rumen Kim, Samuel Soljačić, Marin |
author_facet | Loh, Charlotte Christensen, Thomas Dangovski, Rumen Kim, Samuel Soljačić, Marin |
author_sort | Loh, Charlotte |
collection | PubMed |
description | Deep learning techniques have been increasingly applied to the natural sciences, e.g., for property prediction and optimization or material discovery. A fundamental ingredient of such approaches is the vast quantity of labeled data needed to train the model. This poses severe challenges in data-scarce settings where obtaining labels requires substantial computational or labor resources. Noting that problems in natural sciences often benefit from easily obtainable auxiliary information sources, we introduce surrogate- and invariance-boosted contrastive learning (SIB-CL), a deep learning framework which incorporates three inexpensive and easily obtainable auxiliary information sources to overcome data scarcity. Specifically, these are: abundant unlabeled data, prior knowledge of symmetries or invariances, and surrogate data obtained at near-zero cost. We demonstrate SIB-CL’s effectiveness and generality on various scientific problems, e.g., predicting the density-of-states of 2D photonic crystals and solving the 3D time-independent Schrödinger equation. SIB-CL consistently results in orders of magnitude reduction in the number of labels needed to achieve the same network accuracies. |
format | Online Article Text |
id | pubmed-9304370 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-93043702022-07-23 Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science Loh, Charlotte Christensen, Thomas Dangovski, Rumen Kim, Samuel Soljačić, Marin Nat Commun Article Deep learning techniques have been increasingly applied to the natural sciences, e.g., for property prediction and optimization or material discovery. A fundamental ingredient of such approaches is the vast quantity of labeled data needed to train the model. This poses severe challenges in data-scarce settings where obtaining labels requires substantial computational or labor resources. Noting that problems in natural sciences often benefit from easily obtainable auxiliary information sources, we introduce surrogate- and invariance-boosted contrastive learning (SIB-CL), a deep learning framework which incorporates three inexpensive and easily obtainable auxiliary information sources to overcome data scarcity. Specifically, these are: abundant unlabeled data, prior knowledge of symmetries or invariances, and surrogate data obtained at near-zero cost. We demonstrate SIB-CL’s effectiveness and generality on various scientific problems, e.g., predicting the density-of-states of 2D photonic crystals and solving the 3D time-independent Schrödinger equation. SIB-CL consistently results in orders of magnitude reduction in the number of labels needed to achieve the same network accuracies. Nature Publishing Group UK 2022-07-21 /pmc/articles/PMC9304370/ /pubmed/35864122 http://dx.doi.org/10.1038/s41467-022-31915-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Loh, Charlotte Christensen, Thomas Dangovski, Rumen Kim, Samuel Soljačić, Marin Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title | Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title_full | Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title_fullStr | Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title_full_unstemmed | Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title_short | Surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
title_sort | surrogate- and invariance-boosted contrastive learning for data-scarce applications in science |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304370/ https://www.ncbi.nlm.nih.gov/pubmed/35864122 http://dx.doi.org/10.1038/s41467-022-31915-y |
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