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Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding
Fast noninvasive probing of spatially varying decorrelating events, such as cerebral blood flow beneath the human skull, is an essential task in various scientific and clinical settings. One of the primary optical techniques used is diffuse correlation spectroscopy (DCS), whose classical implementat...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304989/ https://www.ncbi.nlm.nih.gov/pubmed/35873809 http://dx.doi.org/10.3389/fnins.2022.908770 |
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author | Xu, Shiqi Liu, Wenhui Yang, Xi Jönsson, Joakim Qian, Ruobing McKee, Paul Kim, Kanghyun Konda, Pavan Chandra Zhou, Kevin C. Kreiß, Lucas Wang, Haoqian Berrocal, Edouard Huettel, Scott A. Horstmeyer, Roarke |
author_facet | Xu, Shiqi Liu, Wenhui Yang, Xi Jönsson, Joakim Qian, Ruobing McKee, Paul Kim, Kanghyun Konda, Pavan Chandra Zhou, Kevin C. Kreiß, Lucas Wang, Haoqian Berrocal, Edouard Huettel, Scott A. Horstmeyer, Roarke |
author_sort | Xu, Shiqi |
collection | PubMed |
description | Fast noninvasive probing of spatially varying decorrelating events, such as cerebral blood flow beneath the human skull, is an essential task in various scientific and clinical settings. One of the primary optical techniques used is diffuse correlation spectroscopy (DCS), whose classical implementation uses a single or few single-photon detectors, resulting in poor spatial localization accuracy and relatively low temporal resolution. Here, we propose a technique termed Classifying Rapid decorrelation Events via Parallelized single photon dEtection (CREPE), a new form of DCS that can probe and classify different decorrelating movements hidden underneath turbid volume with high sensitivity using parallelized speckle detection from a 32 × 32 pixel SPAD array. We evaluate our setup by classifying different spatiotemporal-decorrelating patterns hidden beneath a 5 mm tissue-like phantom made with rapidly decorrelating dynamic scattering media. Twelve multi-mode fibers are used to collect scattered light from different positions on the surface of the tissue phantom. To validate our setup, we generate perturbed decorrelation patterns by both a digital micromirror device (DMD) modulated at multi-kilo-hertz rates, as well as a vessel phantom containing flowing fluid. Along with a deep contrastive learning algorithm that outperforms classic unsupervised learning methods, we demonstrate our approach can accurately detect and classify different transient decorrelation events (happening in 0.1–0.4 s) underneath turbid scattering media, without any data labeling. This has the potential to be applied to non-invasively monitor deep tissue motion patterns, for example identifying normal or abnormal cerebral blood flow events, at multi-Hertz rates within a compact and static detection probe. |
format | Online Article Text |
id | pubmed-9304989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93049892022-07-23 Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding Xu, Shiqi Liu, Wenhui Yang, Xi Jönsson, Joakim Qian, Ruobing McKee, Paul Kim, Kanghyun Konda, Pavan Chandra Zhou, Kevin C. Kreiß, Lucas Wang, Haoqian Berrocal, Edouard Huettel, Scott A. Horstmeyer, Roarke Front Neurosci Neuroscience Fast noninvasive probing of spatially varying decorrelating events, such as cerebral blood flow beneath the human skull, is an essential task in various scientific and clinical settings. One of the primary optical techniques used is diffuse correlation spectroscopy (DCS), whose classical implementation uses a single or few single-photon detectors, resulting in poor spatial localization accuracy and relatively low temporal resolution. Here, we propose a technique termed Classifying Rapid decorrelation Events via Parallelized single photon dEtection (CREPE), a new form of DCS that can probe and classify different decorrelating movements hidden underneath turbid volume with high sensitivity using parallelized speckle detection from a 32 × 32 pixel SPAD array. We evaluate our setup by classifying different spatiotemporal-decorrelating patterns hidden beneath a 5 mm tissue-like phantom made with rapidly decorrelating dynamic scattering media. Twelve multi-mode fibers are used to collect scattered light from different positions on the surface of the tissue phantom. To validate our setup, we generate perturbed decorrelation patterns by both a digital micromirror device (DMD) modulated at multi-kilo-hertz rates, as well as a vessel phantom containing flowing fluid. Along with a deep contrastive learning algorithm that outperforms classic unsupervised learning methods, we demonstrate our approach can accurately detect and classify different transient decorrelation events (happening in 0.1–0.4 s) underneath turbid scattering media, without any data labeling. This has the potential to be applied to non-invasively monitor deep tissue motion patterns, for example identifying normal or abnormal cerebral blood flow events, at multi-Hertz rates within a compact and static detection probe. Frontiers Media S.A. 2022-07-08 /pmc/articles/PMC9304989/ /pubmed/35873809 http://dx.doi.org/10.3389/fnins.2022.908770 Text en Copyright © 2022 Xu, Liu, Yang, Jönsson, Qian, McKee, Kim, Konda, Zhou, Kreiß, Wang, Berrocal, Huettel and Horstmeyer. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Xu, Shiqi Liu, Wenhui Yang, Xi Jönsson, Joakim Qian, Ruobing McKee, Paul Kim, Kanghyun Konda, Pavan Chandra Zhou, Kevin C. Kreiß, Lucas Wang, Haoqian Berrocal, Edouard Huettel, Scott A. Horstmeyer, Roarke Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title | Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title_full | Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title_fullStr | Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title_full_unstemmed | Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title_short | Transient Motion Classification Through Turbid Volumes via Parallelized Single-Photon Detection and Deep Contrastive Embedding |
title_sort | transient motion classification through turbid volumes via parallelized single-photon detection and deep contrastive embedding |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9304989/ https://www.ncbi.nlm.nih.gov/pubmed/35873809 http://dx.doi.org/10.3389/fnins.2022.908770 |
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