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Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents

Biocatalysis in organic solvents (OSs) enables more efficient routes to the synthesis of various valuable chemicals. However, OSs often reduce enzymatic activity, which limits the use of enzymes in OSs. Herein, we report a comprehensive understanding of interactions between surface polar substitutio...

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Autores principales: Cui, Haiyang, Vedder, Markus, Zhang, Lingling, Jaeger, Karl‐Erich, Schwaneberg, Ulrich, Davari, Mehdi D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9305861/
https://www.ncbi.nlm.nih.gov/pubmed/35007408
http://dx.doi.org/10.1002/cssc.202102551
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author Cui, Haiyang
Vedder, Markus
Zhang, Lingling
Jaeger, Karl‐Erich
Schwaneberg, Ulrich
Davari, Mehdi D.
author_facet Cui, Haiyang
Vedder, Markus
Zhang, Lingling
Jaeger, Karl‐Erich
Schwaneberg, Ulrich
Davari, Mehdi D.
author_sort Cui, Haiyang
collection PubMed
description Biocatalysis in organic solvents (OSs) enables more efficient routes to the synthesis of various valuable chemicals. However, OSs often reduce enzymatic activity, which limits the use of enzymes in OSs. Herein, we report a comprehensive understanding of interactions between surface polar substitutions and DMSO by integrating molecular dynamics (MD) simulations of 45 variants from Bacillus subtilis lipase A (BSLA) and substitution landscape into a “BSLA‐SSM” library. By systematically analyzing 39 structural‐, solvation‐, and interaction energy‐based observables, we discovered that hydration shell maintenance, DMSO reduction, and decreased local flexibility simultaneously govern the stability of polar variants in OS. Moreover, the fingerprints of 1631 polar‐related variants in three OSs demonstrated that substituting aromatic to polar amino acid(s) hold great potential to highly improve OSs resistance. Hence, surface polar engineering is a powerful strategy to generate OS‐tolerant lipases and other enzymes, thereby adapting the catalyst to the desired reaction and process with OSs.
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spelling pubmed-93058612022-07-28 Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents Cui, Haiyang Vedder, Markus Zhang, Lingling Jaeger, Karl‐Erich Schwaneberg, Ulrich Davari, Mehdi D. ChemSusChem Research Articles Biocatalysis in organic solvents (OSs) enables more efficient routes to the synthesis of various valuable chemicals. However, OSs often reduce enzymatic activity, which limits the use of enzymes in OSs. Herein, we report a comprehensive understanding of interactions between surface polar substitutions and DMSO by integrating molecular dynamics (MD) simulations of 45 variants from Bacillus subtilis lipase A (BSLA) and substitution landscape into a “BSLA‐SSM” library. By systematically analyzing 39 structural‐, solvation‐, and interaction energy‐based observables, we discovered that hydration shell maintenance, DMSO reduction, and decreased local flexibility simultaneously govern the stability of polar variants in OS. Moreover, the fingerprints of 1631 polar‐related variants in three OSs demonstrated that substituting aromatic to polar amino acid(s) hold great potential to highly improve OSs resistance. Hence, surface polar engineering is a powerful strategy to generate OS‐tolerant lipases and other enzymes, thereby adapting the catalyst to the desired reaction and process with OSs. John Wiley and Sons Inc. 2022-02-09 2022-05-06 /pmc/articles/PMC9305861/ /pubmed/35007408 http://dx.doi.org/10.1002/cssc.202102551 Text en © 2022 The Authors. ChemSusChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Cui, Haiyang
Vedder, Markus
Zhang, Lingling
Jaeger, Karl‐Erich
Schwaneberg, Ulrich
Davari, Mehdi D.
Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title_full Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title_fullStr Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title_full_unstemmed Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title_short Polar Substitutions on the Surface of a Lipase Substantially Improve Tolerance in Organic Solvents
title_sort polar substitutions on the surface of a lipase substantially improve tolerance in organic solvents
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9305861/
https://www.ncbi.nlm.nih.gov/pubmed/35007408
http://dx.doi.org/10.1002/cssc.202102551
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