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Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery
PURPOSE: Workflow recognition can aid surgeons before an operation when used as a training tool, during an operation by increasing operating room efficiency, and after an operation in the completion of operation notes. Although several methods have been applied to this task, they have been tested on...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9307536/ https://www.ncbi.nlm.nih.gov/pubmed/35362848 http://dx.doi.org/10.1007/s11548-022-02599-y |
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author | Das, Adrito Bano, Sophia Vasconcelos, Francisco Khan, Danyal Z. Marcus, Hani J Stoyanov, Danail |
author_facet | Das, Adrito Bano, Sophia Vasconcelos, Francisco Khan, Danyal Z. Marcus, Hani J Stoyanov, Danail |
author_sort | Das, Adrito |
collection | PubMed |
description | PURPOSE: Workflow recognition can aid surgeons before an operation when used as a training tool, during an operation by increasing operating room efficiency, and after an operation in the completion of operation notes. Although several methods have been applied to this task, they have been tested on few surgical datasets. Therefore, their generalisability is not well tested, particularly for surgical approaches utilising smaller working spaces which are susceptible to occlusion and necessitate frequent withdrawal of the endoscope. This leads to rapidly changing predictions, which reduces the clinical confidence of the methods, and hence limits their suitability for clinical translation. METHODS: Firstly, the optimal neural network is found using established methods, using endoscopic pituitary surgery as an exemplar. Then, prediction volatility is formally defined as a new evaluation metric as a proxy for uncertainty, and two temporal smoothing functions are created. The first (modal, [Formula: see text] ) mode-averages over the previous n predictions, and the second (threshold, [Formula: see text] ) ensures a class is only changed after being continuously predicted for n predictions. Both functions are independently applied to the predictions of the optimal network. RESULTS: The methods are evaluated on a 50-video dataset using fivefold cross-validation, and the optimised evaluation metric is weighted-[Formula: see text] score. The optimal model is ResNet-50+LSTM achieving 0.84 in 3-phase classification and 0.74 in 7-step classification. Applying threshold smoothing further improves these results, achieving 0.86 in 3-phase classification, and 0.75 in 7-step classification, while also drastically reducing the prediction volatility. CONCLUSION: The results confirm the established methods generalise to endoscopic pituitary surgery, and show simple temporal smoothing not only reduces prediction volatility, but actively improves performance. |
format | Online Article Text |
id | pubmed-9307536 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-93075362022-07-24 Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery Das, Adrito Bano, Sophia Vasconcelos, Francisco Khan, Danyal Z. Marcus, Hani J Stoyanov, Danail Int J Comput Assist Radiol Surg Original Article PURPOSE: Workflow recognition can aid surgeons before an operation when used as a training tool, during an operation by increasing operating room efficiency, and after an operation in the completion of operation notes. Although several methods have been applied to this task, they have been tested on few surgical datasets. Therefore, their generalisability is not well tested, particularly for surgical approaches utilising smaller working spaces which are susceptible to occlusion and necessitate frequent withdrawal of the endoscope. This leads to rapidly changing predictions, which reduces the clinical confidence of the methods, and hence limits their suitability for clinical translation. METHODS: Firstly, the optimal neural network is found using established methods, using endoscopic pituitary surgery as an exemplar. Then, prediction volatility is formally defined as a new evaluation metric as a proxy for uncertainty, and two temporal smoothing functions are created. The first (modal, [Formula: see text] ) mode-averages over the previous n predictions, and the second (threshold, [Formula: see text] ) ensures a class is only changed after being continuously predicted for n predictions. Both functions are independently applied to the predictions of the optimal network. RESULTS: The methods are evaluated on a 50-video dataset using fivefold cross-validation, and the optimised evaluation metric is weighted-[Formula: see text] score. The optimal model is ResNet-50+LSTM achieving 0.84 in 3-phase classification and 0.74 in 7-step classification. Applying threshold smoothing further improves these results, achieving 0.86 in 3-phase classification, and 0.75 in 7-step classification, while also drastically reducing the prediction volatility. CONCLUSION: The results confirm the established methods generalise to endoscopic pituitary surgery, and show simple temporal smoothing not only reduces prediction volatility, but actively improves performance. Springer International Publishing 2022-04-01 2022 /pmc/articles/PMC9307536/ /pubmed/35362848 http://dx.doi.org/10.1007/s11548-022-02599-y Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Das, Adrito Bano, Sophia Vasconcelos, Francisco Khan, Danyal Z. Marcus, Hani J Stoyanov, Danail Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title | Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title_full | Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title_fullStr | Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title_full_unstemmed | Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title_short | Reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
title_sort | reducing prediction volatility in the surgical workflow recognition of endoscopic pituitary surgery |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9307536/ https://www.ncbi.nlm.nih.gov/pubmed/35362848 http://dx.doi.org/10.1007/s11548-022-02599-y |
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