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Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer

Differences in the tumor immune microenvironment may result in differences in prognosis and response to treatment in cancer patients. We hypothesized that differences in the tumor immune microenvironment may exist between African American (AA) and NonAA patients, due to ancestry-related or socioecon...

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Autores principales: Marczyk, Michal, Qing, Tao, O’Meara, Tess, Yagahoobi, Vesal, Pelekanou, Vasiliki, Bai, Yalai, Reisenbichler, Emily, Cole, Kimberly S., Li, Xiaotong, Gunasekharan, Vignesh, Ibrahim, Eiman, Fanucci, Kristina, Wei, Wei, Rimm, David L., Pusztai, Lajos, Blenman, Kim R. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9307813/
https://www.ncbi.nlm.nih.gov/pubmed/35869114
http://dx.doi.org/10.1038/s41523-022-00449-3
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author Marczyk, Michal
Qing, Tao
O’Meara, Tess
Yagahoobi, Vesal
Pelekanou, Vasiliki
Bai, Yalai
Reisenbichler, Emily
Cole, Kimberly S.
Li, Xiaotong
Gunasekharan, Vignesh
Ibrahim, Eiman
Fanucci, Kristina
Wei, Wei
Rimm, David L.
Pusztai, Lajos
Blenman, Kim R. M.
author_facet Marczyk, Michal
Qing, Tao
O’Meara, Tess
Yagahoobi, Vesal
Pelekanou, Vasiliki
Bai, Yalai
Reisenbichler, Emily
Cole, Kimberly S.
Li, Xiaotong
Gunasekharan, Vignesh
Ibrahim, Eiman
Fanucci, Kristina
Wei, Wei
Rimm, David L.
Pusztai, Lajos
Blenman, Kim R. M.
author_sort Marczyk, Michal
collection PubMed
description Differences in the tumor immune microenvironment may result in differences in prognosis and response to treatment in cancer patients. We hypothesized that differences in the tumor immune microenvironment may exist between African American (AA) and NonAA patients, due to ancestry-related or socioeconomic factors, that may partially explain differences in clinical outcomes. We analyzed clinically matched triple-negative breast cancer (TNBC) tissues from self-identified AA and NonAA patients and found that stromal TILs, PD-L1 IHC-positivity, mRNA expression of immune-related pathways, and immunotherapy response predictive signatures were significantly higher in AA samples (p < 0.05; Fisher’s Exact Test, Mann–Whitney Test, Permutation Test). Cancer biology and metabolism pathways, TAM-M2, and Immune Exclusion were significantly higher in NonAA samples (p < 0.05; Permutation Test, Mann–Whitney Test). There were no differences in somatic tumor mutation burden. Overall, there is greater immune infiltration and inflammation in AA TNBC and these differences may impact response to immune checkpoint inhibitors and other therapeutic agents that modulate the immune microenvironment.
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spelling pubmed-93078132022-07-24 Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer Marczyk, Michal Qing, Tao O’Meara, Tess Yagahoobi, Vesal Pelekanou, Vasiliki Bai, Yalai Reisenbichler, Emily Cole, Kimberly S. Li, Xiaotong Gunasekharan, Vignesh Ibrahim, Eiman Fanucci, Kristina Wei, Wei Rimm, David L. Pusztai, Lajos Blenman, Kim R. M. NPJ Breast Cancer Article Differences in the tumor immune microenvironment may result in differences in prognosis and response to treatment in cancer patients. We hypothesized that differences in the tumor immune microenvironment may exist between African American (AA) and NonAA patients, due to ancestry-related or socioeconomic factors, that may partially explain differences in clinical outcomes. We analyzed clinically matched triple-negative breast cancer (TNBC) tissues from self-identified AA and NonAA patients and found that stromal TILs, PD-L1 IHC-positivity, mRNA expression of immune-related pathways, and immunotherapy response predictive signatures were significantly higher in AA samples (p < 0.05; Fisher’s Exact Test, Mann–Whitney Test, Permutation Test). Cancer biology and metabolism pathways, TAM-M2, and Immune Exclusion were significantly higher in NonAA samples (p < 0.05; Permutation Test, Mann–Whitney Test). There were no differences in somatic tumor mutation burden. Overall, there is greater immune infiltration and inflammation in AA TNBC and these differences may impact response to immune checkpoint inhibitors and other therapeutic agents that modulate the immune microenvironment. Nature Publishing Group UK 2022-07-22 /pmc/articles/PMC9307813/ /pubmed/35869114 http://dx.doi.org/10.1038/s41523-022-00449-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Marczyk, Michal
Qing, Tao
O’Meara, Tess
Yagahoobi, Vesal
Pelekanou, Vasiliki
Bai, Yalai
Reisenbichler, Emily
Cole, Kimberly S.
Li, Xiaotong
Gunasekharan, Vignesh
Ibrahim, Eiman
Fanucci, Kristina
Wei, Wei
Rimm, David L.
Pusztai, Lajos
Blenman, Kim R. M.
Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title_full Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title_fullStr Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title_full_unstemmed Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title_short Tumor immune microenvironment of self-identified African American and non-African American triple negative breast cancer
title_sort tumor immune microenvironment of self-identified african american and non-african american triple negative breast cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9307813/
https://www.ncbi.nlm.nih.gov/pubmed/35869114
http://dx.doi.org/10.1038/s41523-022-00449-3
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