Cargando…
Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
Liver is an important organ for glucose and lipid metabolism, immunity, and detoxification in fish. However, the gene regulatory network of postnatal liver development still remains unknown in teleost fish. In this study, we performed transcriptome analysis on the liver of S. prenanti at three stage...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9309550/ https://www.ncbi.nlm.nih.gov/pubmed/35899028 http://dx.doi.org/10.3389/fphys.2022.928858 |
_version_ | 1784753190379454464 |
---|---|
author | Ni, Jiahui Zhu, Peng Mo, Qilang Luo, Wei Du, Zongjun Jiang, Jun Yang, Song Zhao, Liulan Gong, Quan Wang, Yan |
author_facet | Ni, Jiahui Zhu, Peng Mo, Qilang Luo, Wei Du, Zongjun Jiang, Jun Yang, Song Zhao, Liulan Gong, Quan Wang, Yan |
author_sort | Ni, Jiahui |
collection | PubMed |
description | Liver is an important organ for glucose and lipid metabolism, immunity, and detoxification in fish. However, the gene regulatory network of postnatal liver development still remains unknown in teleost fish. In this study, we performed transcriptome analysis on the liver of S. prenanti at three stages. A total of 1692 differentially expressed genes (DGEs) were identified across three liver developmental stages. The oil red O staining and PAS staining revealed that the lipid content of liver was increased and the glycogen content of liver was decreased during liver development. The fatty acids biosynthesis related genes were upregulated in adult and young stages compared with juvenile stage, while lipid degradation related genes were downregulated. The genes related to glycolysis, gluconeogenesis and glycogenolysis were upregulated in juvenile or young stages compared with adult stage. Further pathway analysis indicated that the CYP450 pathway, cell cycle and amino acid metabolic pathway were induced in the process of liver maturation. Our study presents the gene expression pattern in different liver development stages of S. prenanti and may guide future studies on metabolism of S. prenanti liver. |
format | Online Article Text |
id | pubmed-9309550 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93095502022-07-26 Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti Ni, Jiahui Zhu, Peng Mo, Qilang Luo, Wei Du, Zongjun Jiang, Jun Yang, Song Zhao, Liulan Gong, Quan Wang, Yan Front Physiol Physiology Liver is an important organ for glucose and lipid metabolism, immunity, and detoxification in fish. However, the gene regulatory network of postnatal liver development still remains unknown in teleost fish. In this study, we performed transcriptome analysis on the liver of S. prenanti at three stages. A total of 1692 differentially expressed genes (DGEs) were identified across three liver developmental stages. The oil red O staining and PAS staining revealed that the lipid content of liver was increased and the glycogen content of liver was decreased during liver development. The fatty acids biosynthesis related genes were upregulated in adult and young stages compared with juvenile stage, while lipid degradation related genes were downregulated. The genes related to glycolysis, gluconeogenesis and glycogenolysis were upregulated in juvenile or young stages compared with adult stage. Further pathway analysis indicated that the CYP450 pathway, cell cycle and amino acid metabolic pathway were induced in the process of liver maturation. Our study presents the gene expression pattern in different liver development stages of S. prenanti and may guide future studies on metabolism of S. prenanti liver. Frontiers Media S.A. 2022-07-11 /pmc/articles/PMC9309550/ /pubmed/35899028 http://dx.doi.org/10.3389/fphys.2022.928858 Text en Copyright © 2022 Ni, Zhu, Mo, Luo, Du, Jiang, Yang, Zhao, Gong and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Ni, Jiahui Zhu, Peng Mo, Qilang Luo, Wei Du, Zongjun Jiang, Jun Yang, Song Zhao, Liulan Gong, Quan Wang, Yan Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti |
title | Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
|
title_full | Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
|
title_fullStr | Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
|
title_full_unstemmed | Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
|
title_short | Dynamic Transcriptomic Profiling During Liver Development in Schizothorax Prenanti
|
title_sort | dynamic transcriptomic profiling during liver development in schizothorax prenanti |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9309550/ https://www.ncbi.nlm.nih.gov/pubmed/35899028 http://dx.doi.org/10.3389/fphys.2022.928858 |
work_keys_str_mv | AT nijiahui dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT zhupeng dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT moqilang dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT luowei dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT duzongjun dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT jiangjun dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT yangsong dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT zhaoliulan dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT gongquan dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti AT wangyan dynamictranscriptomicprofilingduringliverdevelopmentinschizothoraxprenanti |