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First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans

This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communiti...

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Detalles Bibliográficos
Autores principales: Dhar, Gaurab Aditya, Ganguli, Sayak, Mallick, Bidisha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9309684/
https://www.ncbi.nlm.nih.gov/pubmed/35898864
http://dx.doi.org/10.1016/j.dib.2022.108468
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author Dhar, Gaurab Aditya
Ganguli, Sayak
Mallick, Bidisha
author_facet Dhar, Gaurab Aditya
Ganguli, Sayak
Mallick, Bidisha
author_sort Dhar, Gaurab Aditya
collection PubMed
description This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communities prevalent in the rhizosphere. A total of 1,74,324 quality checked reads were assembled into contigs and were analyzed using QIIME2 and MetaG server to reveal the abundance of Proteobacteria, Bacteroidetes and Actinobacteria. The data is available at the NCBI - Sequence Read Archive with accession number: SRR15652592. This is the first report of the rhizospheric microbiome belonging to this plant from the Indian Sundarbans.
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spelling pubmed-93096842022-07-26 First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans Dhar, Gaurab Aditya Ganguli, Sayak Mallick, Bidisha Data Brief Data Article This article reports the analyses of the rhizospheric microbiome of the terrestrial mangrove Ceriops tagal (Perr.) C.B.Rob. from the Indian Sundarbans. Samples were collected using standard protocols and 16S rRNA gene V3–V4 region amplicon sequencing was performed to identify the bacterial communities prevalent in the rhizosphere. A total of 1,74,324 quality checked reads were assembled into contigs and were analyzed using QIIME2 and MetaG server to reveal the abundance of Proteobacteria, Bacteroidetes and Actinobacteria. The data is available at the NCBI - Sequence Read Archive with accession number: SRR15652592. This is the first report of the rhizospheric microbiome belonging to this plant from the Indian Sundarbans. Elsevier 2022-07-14 /pmc/articles/PMC9309684/ /pubmed/35898864 http://dx.doi.org/10.1016/j.dib.2022.108468 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Dhar, Gaurab Aditya
Ganguli, Sayak
Mallick, Bidisha
First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title_full First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title_fullStr First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title_full_unstemmed First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title_short First insights into the rhizospheric bacterial abundance data of Ceriops tagal (Perr.) C.B.Rob. from Indian Sundarbans
title_sort first insights into the rhizospheric bacterial abundance data of ceriops tagal (perr.) c.b.rob. from indian sundarbans
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9309684/
https://www.ncbi.nlm.nih.gov/pubmed/35898864
http://dx.doi.org/10.1016/j.dib.2022.108468
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