Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)

In this study, the chloroplast (Cp) genome of Zanthoxylum avicennae (Lam.) DC was sequenced by high-throughput sequencing technology. The length of the Cp genome of Zanthoxylum avicennae was 158,568 bp, and the total GC content was 38.4%, including a large single-copy (LSC) region of 86,318 bp, a sm...

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Detalles Bibliográficos
Autores principales: Li, Jin-jin, Qiu, Qian, Yin, Fu-qiang, Liu, Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9310787/
https://www.ncbi.nlm.nih.gov/pubmed/35898663
http://dx.doi.org/10.1080/23802359.2022.2097894
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author Li, Jin-jin
Qiu, Qian
Yin, Fu-qiang
Liu, Ming
author_facet Li, Jin-jin
Qiu, Qian
Yin, Fu-qiang
Liu, Ming
author_sort Li, Jin-jin
collection PubMed
description In this study, the chloroplast (Cp) genome of Zanthoxylum avicennae (Lam.) DC was sequenced by high-throughput sequencing technology. The length of the Cp genome of Zanthoxylum avicennae was 158,568 bp, and the total GC content was 38.4%, including a large single-copy (LSC) region of 86,318 bp, a small single-copy (SSC) region of 18,250 bp, and 27,000 bp of inverted repeats (IRs). The Cp genome encoded 131 genes, including 88 protein-coding, 37 tRNA, and six rRNA genes. Phylogenetic analysis of the genome sequence showed that Zanthoxylum avicennae was closely related to Zanthoxylum nitidum, Zanthoxylum esquirolii and Zanthoxylum motuoense of the Rutaceae family.
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spelling pubmed-93107872022-07-26 Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum) Li, Jin-jin Qiu, Qian Yin, Fu-qiang Liu, Ming Mitochondrial DNA B Resour Plastome Announcement In this study, the chloroplast (Cp) genome of Zanthoxylum avicennae (Lam.) DC was sequenced by high-throughput sequencing technology. The length of the Cp genome of Zanthoxylum avicennae was 158,568 bp, and the total GC content was 38.4%, including a large single-copy (LSC) region of 86,318 bp, a small single-copy (SSC) region of 18,250 bp, and 27,000 bp of inverted repeats (IRs). The Cp genome encoded 131 genes, including 88 protein-coding, 37 tRNA, and six rRNA genes. Phylogenetic analysis of the genome sequence showed that Zanthoxylum avicennae was closely related to Zanthoxylum nitidum, Zanthoxylum esquirolii and Zanthoxylum motuoense of the Rutaceae family. Taylor & Francis 2022-07-22 /pmc/articles/PMC9310787/ /pubmed/35898663 http://dx.doi.org/10.1080/23802359.2022.2097894 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Li, Jin-jin
Qiu, Qian
Yin, Fu-qiang
Liu, Ming
Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title_full Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title_fullStr Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title_full_unstemmed Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title_short Complete chloroplast genome of Zanthoxylum avicennae (Lam.) DC (Rutaceae: Zanthoxylum)
title_sort complete chloroplast genome of zanthoxylum avicennae (lam.) dc (rutaceae: zanthoxylum)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9310787/
https://www.ncbi.nlm.nih.gov/pubmed/35898663
http://dx.doi.org/10.1080/23802359.2022.2097894
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