Cargando…

Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis

OBJECTIVES: In this study, we aimed to investigate the effect of p62 on angiogenesis and microRNA (miRNA) expression profiles in acute myeloid leukemia (AML) exosomes. METHODS: An Exiqon v19.0 microRNA MicroArray was used to profile miRNAs in exosomes derived from parental and p62-knockdown U937 cel...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Chuan, Long, Xinyi, Liang, Peiqi, Liu, Zhuogang, Wang, Chen, Hu, Rong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9310811/
https://www.ncbi.nlm.nih.gov/pubmed/35898936
http://dx.doi.org/10.7717/peerj.13498
_version_ 1784753470161551360
author Li, Chuan
Long, Xinyi
Liang, Peiqi
Liu, Zhuogang
Wang, Chen
Hu, Rong
author_facet Li, Chuan
Long, Xinyi
Liang, Peiqi
Liu, Zhuogang
Wang, Chen
Hu, Rong
author_sort Li, Chuan
collection PubMed
description OBJECTIVES: In this study, we aimed to investigate the effect of p62 on angiogenesis and microRNA (miRNA) expression profiles in acute myeloid leukemia (AML) exosomes. METHODS: An Exiqon v19.0 microRNA MicroArray was used to profile miRNAs in exosomes derived from parental and p62-knockdown U937 cells. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases were used to predict the biological functions and potential mechanisms of differentially expressed miRNAs in AML exosomes. Endothelial cell tube formation assays using human umbilical vein endothelial cells (HUVECs) were performed to investigate the effect of AML exosomes on angiogenesis. RESULTS: We demonstrated that 2,080 miRNAs were expressed in exosomes derived from our cultured cell samples, of which 215 and 208 miRNAs were upregulated and downregulated, respectively, in p62-knockdown U937 cells (fold change ≥ 2, P < 0.05). GO analysis indicated that miRNAs were most enriched in the intercellular pathways. Biological process analysis revealed that 1460 biological processes were associated with downregulated transcripts, including 19 pathways related to vesicles, and 1,515 pathways were upregulated, including 8 pathways related to vesicles. Molecular function analysis indicated that protein binding, transcription regulator activity, and DNA-binding transcription factor activity were enriched (P < 0.05). Pathway analysis indicated that 84 pathways corresponded to upregulated transcripts, and 55 pathways corresponded to downregulated transcripts (P < 0.05). We also found that exosomes derived from U937 cells promoted angiogenesis in HUVECs. CONCLUSIONS: Our data suggest that exosomal miRNAs may play important roles in the pathogenesis of AML, which may be treated by p62 knockdown with exosomal miRNAs to inhibit angiogenesis.
format Online
Article
Text
id pubmed-9310811
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-93108112022-07-26 Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis Li, Chuan Long, Xinyi Liang, Peiqi Liu, Zhuogang Wang, Chen Hu, Rong PeerJ Biochemistry OBJECTIVES: In this study, we aimed to investigate the effect of p62 on angiogenesis and microRNA (miRNA) expression profiles in acute myeloid leukemia (AML) exosomes. METHODS: An Exiqon v19.0 microRNA MicroArray was used to profile miRNAs in exosomes derived from parental and p62-knockdown U937 cells. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) databases were used to predict the biological functions and potential mechanisms of differentially expressed miRNAs in AML exosomes. Endothelial cell tube formation assays using human umbilical vein endothelial cells (HUVECs) were performed to investigate the effect of AML exosomes on angiogenesis. RESULTS: We demonstrated that 2,080 miRNAs were expressed in exosomes derived from our cultured cell samples, of which 215 and 208 miRNAs were upregulated and downregulated, respectively, in p62-knockdown U937 cells (fold change ≥ 2, P < 0.05). GO analysis indicated that miRNAs were most enriched in the intercellular pathways. Biological process analysis revealed that 1460 biological processes were associated with downregulated transcripts, including 19 pathways related to vesicles, and 1,515 pathways were upregulated, including 8 pathways related to vesicles. Molecular function analysis indicated that protein binding, transcription regulator activity, and DNA-binding transcription factor activity were enriched (P < 0.05). Pathway analysis indicated that 84 pathways corresponded to upregulated transcripts, and 55 pathways corresponded to downregulated transcripts (P < 0.05). We also found that exosomes derived from U937 cells promoted angiogenesis in HUVECs. CONCLUSIONS: Our data suggest that exosomal miRNAs may play important roles in the pathogenesis of AML, which may be treated by p62 knockdown with exosomal miRNAs to inhibit angiogenesis. PeerJ Inc. 2022-07-22 /pmc/articles/PMC9310811/ /pubmed/35898936 http://dx.doi.org/10.7717/peerj.13498 Text en ©2022 Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biochemistry
Li, Chuan
Long, Xinyi
Liang, Peiqi
Liu, Zhuogang
Wang, Chen
Hu, Rong
Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title_full Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title_fullStr Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title_full_unstemmed Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title_short Analysis of microRNA expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
title_sort analysis of microrna expression profiles in exosomes derived from acute myeloid leukemia by p62 knockdown and effect on angiogenesis
topic Biochemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9310811/
https://www.ncbi.nlm.nih.gov/pubmed/35898936
http://dx.doi.org/10.7717/peerj.13498
work_keys_str_mv AT lichuan analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis
AT longxinyi analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis
AT liangpeiqi analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis
AT liuzhuogang analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis
AT wangchen analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis
AT hurong analysisofmicrornaexpressionprofilesinexosomesderivedfromacutemyeloidleukemiabyp62knockdownandeffectonangiogenesis