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A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture

SIMPLE SUMMARY: Individual growth models of animals are the basis of ecosystem models, which are important tools for aquaculture management. The lack of mechanistic growth model studies of kuruma shrimp, an important integrated marine aquaculture species, has hindered ecosystem-level aquaculture man...

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Autores principales: Dong, Shipeng, Liu, Dapeng, Zhu, Boshan, Yu, Liye, Shan, Hongwei, Wang, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9311514/
https://www.ncbi.nlm.nih.gov/pubmed/35883375
http://dx.doi.org/10.3390/ani12141828
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author Dong, Shipeng
Liu, Dapeng
Zhu, Boshan
Yu, Liye
Shan, Hongwei
Wang, Fang
author_facet Dong, Shipeng
Liu, Dapeng
Zhu, Boshan
Yu, Liye
Shan, Hongwei
Wang, Fang
author_sort Dong, Shipeng
collection PubMed
description SIMPLE SUMMARY: Individual growth models of animals are the basis of ecosystem models, which are important tools for aquaculture management. The lack of mechanistic growth model studies of kuruma shrimp, an important integrated marine aquaculture species, has hindered ecosystem-level aquaculture management. In this study, an individual growth model of kuruma shrimp was constructed based on the dynamic energy budget theory, and the goodness of fit of both parameterization and application was high. The results showed that the model could reproduce the growth of kuruma shrimp in terms of total length and wet weight. ABSTRACT: Individual growth models can form the basis of population dynamics assessment and ecosystem model construction. In order to provide a basic module for an ecosystem model of an integrated marine aquaculture pond, an individual growth model was constructed for kuruma shrimp (Penaeus japonicus) based on dynamic energy budget (DEB) theory. The model was first parameterized based on a covariation method using the Add-my-Pet (AmP) procedure. The parametric estimation model underestimated the ultimate abdominal length for female shrimp, and the predicted values of other zero-variate parameters were generally consistent with observed values. The relative errors of the predicted and observed values of the univariate data set within three geographical regions showed acceptable goodness of fit. Parameter estimation achieved an overall goodness of fit with a mean relative error of 0.048 and a symmetric mean squared error of 0.066. A DEB model was constructed using the estimated parameters, and the goodness-of-fit indicators (R square, mean bias and absolute and relative root mean square error) showed that the model was able to reproduce the growth of kuruma shrimp in terms of total length and wet weight with high accuracy. The results provide data to support the subsequent development of integrated aquaculture management at the ecosystem level.
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spelling pubmed-93115142022-07-26 A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture Dong, Shipeng Liu, Dapeng Zhu, Boshan Yu, Liye Shan, Hongwei Wang, Fang Animals (Basel) Article SIMPLE SUMMARY: Individual growth models of animals are the basis of ecosystem models, which are important tools for aquaculture management. The lack of mechanistic growth model studies of kuruma shrimp, an important integrated marine aquaculture species, has hindered ecosystem-level aquaculture management. In this study, an individual growth model of kuruma shrimp was constructed based on the dynamic energy budget theory, and the goodness of fit of both parameterization and application was high. The results showed that the model could reproduce the growth of kuruma shrimp in terms of total length and wet weight. ABSTRACT: Individual growth models can form the basis of population dynamics assessment and ecosystem model construction. In order to provide a basic module for an ecosystem model of an integrated marine aquaculture pond, an individual growth model was constructed for kuruma shrimp (Penaeus japonicus) based on dynamic energy budget (DEB) theory. The model was first parameterized based on a covariation method using the Add-my-Pet (AmP) procedure. The parametric estimation model underestimated the ultimate abdominal length for female shrimp, and the predicted values of other zero-variate parameters were generally consistent with observed values. The relative errors of the predicted and observed values of the univariate data set within three geographical regions showed acceptable goodness of fit. Parameter estimation achieved an overall goodness of fit with a mean relative error of 0.048 and a symmetric mean squared error of 0.066. A DEB model was constructed using the estimated parameters, and the goodness-of-fit indicators (R square, mean bias and absolute and relative root mean square error) showed that the model was able to reproduce the growth of kuruma shrimp in terms of total length and wet weight with high accuracy. The results provide data to support the subsequent development of integrated aquaculture management at the ecosystem level. MDPI 2022-07-18 /pmc/articles/PMC9311514/ /pubmed/35883375 http://dx.doi.org/10.3390/ani12141828 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dong, Shipeng
Liu, Dapeng
Zhu, Boshan
Yu, Liye
Shan, Hongwei
Wang, Fang
A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title_full A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title_fullStr A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title_full_unstemmed A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title_short A Dynamic Energy Budget Model for Kuruma Shrimp Penaeus japonicus: Parameterization and Application in Integrated Marine Pond Aquaculture
title_sort dynamic energy budget model for kuruma shrimp penaeus japonicus: parameterization and application in integrated marine pond aquaculture
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9311514/
https://www.ncbi.nlm.nih.gov/pubmed/35883375
http://dx.doi.org/10.3390/ani12141828
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