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Driver Gene Alterations in Malignant Progression of Gastric Cancer
The identification of driver genes is of great importance in modern medical research. It is also an essential factor in the development of individualization and has a positive effect on understanding the causes of cancer. Gene mutations are the primary cause of the outcomes of the process of tumorig...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9315095/ https://www.ncbi.nlm.nih.gov/pubmed/35903675 http://dx.doi.org/10.3389/fonc.2022.920207 |
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author | Dong, Yuanqiang Song, Ning Wang, Jun Shi, Liubin Zhang, Ziqiang Du, Jianjun |
author_facet | Dong, Yuanqiang Song, Ning Wang, Jun Shi, Liubin Zhang, Ziqiang Du, Jianjun |
author_sort | Dong, Yuanqiang |
collection | PubMed |
description | The identification of driver genes is of great importance in modern medical research. It is also an essential factor in the development of individualization and has a positive effect on understanding the causes of cancer. Gene mutations are the primary cause of the outcomes of the process of tumorigenesis. Driver genes can be used as therapeutic targets for tumor-specific mutation-dependent overexpression. This study sought to identify mutation-based driver genes in gastric cancer (GC) by applying comprehensive gene expression and copy number analysis. Multiplatform analysis was used to identify four major genomic subtypes of GC. The most prominent cancer-related variations observed in this cohort were TTN mutations (found in 56% of tumors), followed by TP53 (51%), MUC16 (7%), and LRP1B (6%) mutations. In our analysis, mutation characteristics were mainly related to the DNA mismatch repair system. In addition, 34 candidate driver oncogenes were identified in GC. Further research identified six GC-related driver genes associated with the levels of immune infiltration of different immune cells and the majority of immune markers. Our mutation-based study of driver oncogenes identified potential drug targets in GC. |
format | Online Article Text |
id | pubmed-9315095 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93150952022-07-27 Driver Gene Alterations in Malignant Progression of Gastric Cancer Dong, Yuanqiang Song, Ning Wang, Jun Shi, Liubin Zhang, Ziqiang Du, Jianjun Front Oncol Oncology The identification of driver genes is of great importance in modern medical research. It is also an essential factor in the development of individualization and has a positive effect on understanding the causes of cancer. Gene mutations are the primary cause of the outcomes of the process of tumorigenesis. Driver genes can be used as therapeutic targets for tumor-specific mutation-dependent overexpression. This study sought to identify mutation-based driver genes in gastric cancer (GC) by applying comprehensive gene expression and copy number analysis. Multiplatform analysis was used to identify four major genomic subtypes of GC. The most prominent cancer-related variations observed in this cohort were TTN mutations (found in 56% of tumors), followed by TP53 (51%), MUC16 (7%), and LRP1B (6%) mutations. In our analysis, mutation characteristics were mainly related to the DNA mismatch repair system. In addition, 34 candidate driver oncogenes were identified in GC. Further research identified six GC-related driver genes associated with the levels of immune infiltration of different immune cells and the majority of immune markers. Our mutation-based study of driver oncogenes identified potential drug targets in GC. Frontiers Media S.A. 2022-07-12 /pmc/articles/PMC9315095/ /pubmed/35903675 http://dx.doi.org/10.3389/fonc.2022.920207 Text en Copyright © 2022 Dong, Song, Wang, Shi, Zhang and Du https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Dong, Yuanqiang Song, Ning Wang, Jun Shi, Liubin Zhang, Ziqiang Du, Jianjun Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title | Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title_full | Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title_fullStr | Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title_full_unstemmed | Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title_short | Driver Gene Alterations in Malignant Progression of Gastric Cancer |
title_sort | driver gene alterations in malignant progression of gastric cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9315095/ https://www.ncbi.nlm.nih.gov/pubmed/35903675 http://dx.doi.org/10.3389/fonc.2022.920207 |
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