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Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses

SIMPLE SUMMARY: Blissidae is a group with high species richness in Lygaeoidea, and most of them live in the leaf sheaths of Poaceae plants. Here, 10 new mitogenomes from 10 species of eight genera from Blissidae were sequenced and analyzed. Gene rearrangement is only found in Pirkimeru japonicus (Pi...

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Autores principales: Wang, Shujing, Zhu, Runqi, Xue, Huaijun, Li, Yanfei, Bu, Wenjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9315831/
https://www.ncbi.nlm.nih.gov/pubmed/35886819
http://dx.doi.org/10.3390/insects13070643
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author Wang, Shujing
Zhu, Runqi
Xue, Huaijun
Li, Yanfei
Bu, Wenjun
author_facet Wang, Shujing
Zhu, Runqi
Xue, Huaijun
Li, Yanfei
Bu, Wenjun
author_sort Wang, Shujing
collection PubMed
description SIMPLE SUMMARY: Blissidae is a group with high species richness in Lygaeoidea, and most of them live in the leaf sheaths of Poaceae plants. Here, 10 new mitogenomes from 10 species of eight genera from Blissidae were sequenced and analyzed. Gene rearrangement is only found in Pirkimeru japonicus (PiGXBS1), which is formed as the duplication of tRNA-H. Coupled with published data, phylogenetic analyses and divergence time were performed in Blissidae. The divergence within Blissidae began about 56 million years ago (Ma), in which the genus level divergence was concentrated at 30–51 Ma, slightly later than the diversification of Poaceae. The consistency of the divergence time between Blissidae and Poaceae might hint at the coevolutionary relationship between them. Our study provides a valuable resource for understanding insect–host relationships. ABSTRACT: Blissidae (the Chinch bug) is a group with high species richness in Lygaeoidea, but there are only a few descriptions of mitochondrial genomes available. We obtained mitogenomes from 10 species of eight genera from Blissidae through second-generation sequencing technology. The length of the mitochondrial genome (excluding the control region) is between 14643 and 14385 bp; the content of AT is between 74.1% and 77.9%. The sequence of the evolution rate of protein coding genes was as follows: ND5 > ATP8 > ND6 > ND2 > ND4 > ND4L > ND1 > ATP6 > ND3 > COIII > COII > CYTB > COI. The mitogenomic structure of Blissidae is highly conservative. Gene rearrangement is only found in Pirkimeru japonicus (PiGXBS1), which is formed as the duplication of tRNA-H. The intergenic spacer between ND4 and tRNA-H, which form an obvious stem-and-loop structure, was found in all samples in this study. The phylogenetic trees generated by BI and ML indicated that Blissidae can be divided into three major clades: Clade A (only included Macropes); Clade B ((Pirkimerus + Bochrus) + Iphicrates); and Clade C ((Ischnodemus + Capodemus) + (Cavelerius + Dimorphopterus)). The divergence within the Blissidae began at about 56 Ma. At the genus level, the divergence was concentrated at 30–51 Ma, slightly later than the diversification of Poaceae. The consistency of divergence time between Blissidae and Poaceae might hint at the coevolutionary relationship between them, but further molecular and biological evidence is still needed to prove it.
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spelling pubmed-93158312022-07-27 Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses Wang, Shujing Zhu, Runqi Xue, Huaijun Li, Yanfei Bu, Wenjun Insects Article SIMPLE SUMMARY: Blissidae is a group with high species richness in Lygaeoidea, and most of them live in the leaf sheaths of Poaceae plants. Here, 10 new mitogenomes from 10 species of eight genera from Blissidae were sequenced and analyzed. Gene rearrangement is only found in Pirkimeru japonicus (PiGXBS1), which is formed as the duplication of tRNA-H. Coupled with published data, phylogenetic analyses and divergence time were performed in Blissidae. The divergence within Blissidae began about 56 million years ago (Ma), in which the genus level divergence was concentrated at 30–51 Ma, slightly later than the diversification of Poaceae. The consistency of the divergence time between Blissidae and Poaceae might hint at the coevolutionary relationship between them. Our study provides a valuable resource for understanding insect–host relationships. ABSTRACT: Blissidae (the Chinch bug) is a group with high species richness in Lygaeoidea, but there are only a few descriptions of mitochondrial genomes available. We obtained mitogenomes from 10 species of eight genera from Blissidae through second-generation sequencing technology. The length of the mitochondrial genome (excluding the control region) is between 14643 and 14385 bp; the content of AT is between 74.1% and 77.9%. The sequence of the evolution rate of protein coding genes was as follows: ND5 > ATP8 > ND6 > ND2 > ND4 > ND4L > ND1 > ATP6 > ND3 > COIII > COII > CYTB > COI. The mitogenomic structure of Blissidae is highly conservative. Gene rearrangement is only found in Pirkimeru japonicus (PiGXBS1), which is formed as the duplication of tRNA-H. The intergenic spacer between ND4 and tRNA-H, which form an obvious stem-and-loop structure, was found in all samples in this study. The phylogenetic trees generated by BI and ML indicated that Blissidae can be divided into three major clades: Clade A (only included Macropes); Clade B ((Pirkimerus + Bochrus) + Iphicrates); and Clade C ((Ischnodemus + Capodemus) + (Cavelerius + Dimorphopterus)). The divergence within the Blissidae began at about 56 Ma. At the genus level, the divergence was concentrated at 30–51 Ma, slightly later than the diversification of Poaceae. The consistency of divergence time between Blissidae and Poaceae might hint at the coevolutionary relationship between them, but further molecular and biological evidence is still needed to prove it. MDPI 2022-07-17 /pmc/articles/PMC9315831/ /pubmed/35886819 http://dx.doi.org/10.3390/insects13070643 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Shujing
Zhu, Runqi
Xue, Huaijun
Li, Yanfei
Bu, Wenjun
Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title_full Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title_fullStr Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title_full_unstemmed Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title_short Mitogenomics of Chinch Bugs from China and Implications for Its Coevolutionary Relationship with Grasses
title_sort mitogenomics of chinch bugs from china and implications for its coevolutionary relationship with grasses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9315831/
https://www.ncbi.nlm.nih.gov/pubmed/35886819
http://dx.doi.org/10.3390/insects13070643
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