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Signal amplification of araC pBAD using a standardized translation initiation region

araC pBAD is a genetic fragment that regulates the expression of the araBAD operon in bacteria, which is required for the metabolism of L-arabinose. It is widely used in bioengineering applications because it can drive regulatable and titratable expression of genes and genetic pathways in microbial...

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Autores principales: Shilling, Patrick J, Khananisho, Diana, Cumming, Alister J, Söderström, Bill, Daley, Daniel O
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9316229/
https://www.ncbi.nlm.nih.gov/pubmed/35903559
http://dx.doi.org/10.1093/synbio/ysac009
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author Shilling, Patrick J
Khananisho, Diana
Cumming, Alister J
Söderström, Bill
Daley, Daniel O
author_facet Shilling, Patrick J
Khananisho, Diana
Cumming, Alister J
Söderström, Bill
Daley, Daniel O
author_sort Shilling, Patrick J
collection PubMed
description araC pBAD is a genetic fragment that regulates the expression of the araBAD operon in bacteria, which is required for the metabolism of L-arabinose. It is widely used in bioengineering applications because it can drive regulatable and titratable expression of genes and genetic pathways in microbial cell factories. A notable limitation of araC pBAD is that it generates a low signal when induced with high concentrations of L-arabinose (the maximum ON state). Herein we have amplified the maximum ON state of araC pBAD by coupling it to a synthetically evolved translation initiation region (TIR(EVOL)). The coupling maintains regulatable and titratable expression from araC pBAD and yet increases the maximal ON state by >5-fold. The general principle demonstrated in the study can be applied to amplify the signal from similar genetic modules. Graphical Abstract [Image: see text]
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spelling pubmed-93162292022-07-27 Signal amplification of araC pBAD using a standardized translation initiation region Shilling, Patrick J Khananisho, Diana Cumming, Alister J Söderström, Bill Daley, Daniel O Synth Biol (Oxf) Research Article araC pBAD is a genetic fragment that regulates the expression of the araBAD operon in bacteria, which is required for the metabolism of L-arabinose. It is widely used in bioengineering applications because it can drive regulatable and titratable expression of genes and genetic pathways in microbial cell factories. A notable limitation of araC pBAD is that it generates a low signal when induced with high concentrations of L-arabinose (the maximum ON state). Herein we have amplified the maximum ON state of araC pBAD by coupling it to a synthetically evolved translation initiation region (TIR(EVOL)). The coupling maintains regulatable and titratable expression from araC pBAD and yet increases the maximal ON state by >5-fold. The general principle demonstrated in the study can be applied to amplify the signal from similar genetic modules. Graphical Abstract [Image: see text] Oxford University Press 2022-07-05 /pmc/articles/PMC9316229/ /pubmed/35903559 http://dx.doi.org/10.1093/synbio/ysac009 Text en © The Author(s) 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research Article
Shilling, Patrick J
Khananisho, Diana
Cumming, Alister J
Söderström, Bill
Daley, Daniel O
Signal amplification of araC pBAD using a standardized translation initiation region
title Signal amplification of araC pBAD using a standardized translation initiation region
title_full Signal amplification of araC pBAD using a standardized translation initiation region
title_fullStr Signal amplification of araC pBAD using a standardized translation initiation region
title_full_unstemmed Signal amplification of araC pBAD using a standardized translation initiation region
title_short Signal amplification of araC pBAD using a standardized translation initiation region
title_sort signal amplification of arac pbad using a standardized translation initiation region
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9316229/
https://www.ncbi.nlm.nih.gov/pubmed/35903559
http://dx.doi.org/10.1093/synbio/ysac009
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