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Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time

Genetic influence on lung functions has been identified in previous studies; however, the relative longitudinal effects of genetic factors and their interactions with smoking on lung function remain unclear. Here, we identified the longitudinal effects of genetic variants on lung function by determi...

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Autores principales: Li, Donghe, Kim, Woojin, An, Jahoon, Kim, Soriul, Lee, Seungku, Do, Ahra, Kim, Wonji, Lee, Sanghun, Yoon, Dankyu, Lee, Kwangbae, Ha, Seounguk, Silverman, Edwin K., Cho, Michael, Shin, Chol, Won, Sungho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9316642/
https://www.ncbi.nlm.nih.gov/pubmed/35886044
http://dx.doi.org/10.3390/genes13071261
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author Li, Donghe
Kim, Woojin
An, Jahoon
Kim, Soriul
Lee, Seungku
Do, Ahra
Kim, Wonji
Lee, Sanghun
Yoon, Dankyu
Lee, Kwangbae
Ha, Seounguk
Silverman, Edwin K.
Cho, Michael
Shin, Chol
Won, Sungho
author_facet Li, Donghe
Kim, Woojin
An, Jahoon
Kim, Soriul
Lee, Seungku
Do, Ahra
Kim, Wonji
Lee, Sanghun
Yoon, Dankyu
Lee, Kwangbae
Ha, Seounguk
Silverman, Edwin K.
Cho, Michael
Shin, Chol
Won, Sungho
author_sort Li, Donghe
collection PubMed
description Genetic influence on lung functions has been identified in previous studies; however, the relative longitudinal effects of genetic factors and their interactions with smoking on lung function remain unclear. Here, we identified the longitudinal effects of genetic variants on lung function by determining single nucleotide polymorphism (SNP) heritability and genetic correlations, and by analyzing interactions with smoking. Subject-specific means and annual change rates were calculated for eight spirometric measures obtained from 6622 Korean adults aged 40–69 years every two years for 14 years, and their heritabilities were estimated separately. Statistically significant (p < 0.05) heritability for the subject-specific means of all spirometric measures (8~32%) and change rates of forced expiratory volume in 1 s to forced vital capacity ratio (FEV(1)/FVC; 16%) and post-bronchodilator FEV(1)/FVC (17%) were detected. Significant genetic correlations of the change rate with the subject-specific mean were observed for FEV(1)/FVC ([Formula: see text] = 0.64) and post-bronchodilator FEV(1)/FVC ([Formula: see text] = 0.47). Furthermore, post-bronchodilator FEV(1)/FVC showed significant heritability of SNP-by-smoking interaction ([Formula: see text] = 0.4) for the annual change rate. The GWAS also detected genome-wide significant SNPs for FEV(1) (rs4793538), FEV(1)/FVC (rs2704589, rs62201158, and rs9391733), and post-bronchodilator FEV(1)/FVC (rs2445936). We found statistically significant evidence of heritability role on the change in lung function, and this was shared with the effects on cross-sectional measurements. We also found some evidence of interaction with smoking for the change of lung function.
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spelling pubmed-93166422022-07-27 Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time Li, Donghe Kim, Woojin An, Jahoon Kim, Soriul Lee, Seungku Do, Ahra Kim, Wonji Lee, Sanghun Yoon, Dankyu Lee, Kwangbae Ha, Seounguk Silverman, Edwin K. Cho, Michael Shin, Chol Won, Sungho Genes (Basel) Article Genetic influence on lung functions has been identified in previous studies; however, the relative longitudinal effects of genetic factors and their interactions with smoking on lung function remain unclear. Here, we identified the longitudinal effects of genetic variants on lung function by determining single nucleotide polymorphism (SNP) heritability and genetic correlations, and by analyzing interactions with smoking. Subject-specific means and annual change rates were calculated for eight spirometric measures obtained from 6622 Korean adults aged 40–69 years every two years for 14 years, and their heritabilities were estimated separately. Statistically significant (p < 0.05) heritability for the subject-specific means of all spirometric measures (8~32%) and change rates of forced expiratory volume in 1 s to forced vital capacity ratio (FEV(1)/FVC; 16%) and post-bronchodilator FEV(1)/FVC (17%) were detected. Significant genetic correlations of the change rate with the subject-specific mean were observed for FEV(1)/FVC ([Formula: see text] = 0.64) and post-bronchodilator FEV(1)/FVC ([Formula: see text] = 0.47). Furthermore, post-bronchodilator FEV(1)/FVC showed significant heritability of SNP-by-smoking interaction ([Formula: see text] = 0.4) for the annual change rate. The GWAS also detected genome-wide significant SNPs for FEV(1) (rs4793538), FEV(1)/FVC (rs2704589, rs62201158, and rs9391733), and post-bronchodilator FEV(1)/FVC (rs2445936). We found statistically significant evidence of heritability role on the change in lung function, and this was shared with the effects on cross-sectional measurements. We also found some evidence of interaction with smoking for the change of lung function. MDPI 2022-07-15 /pmc/articles/PMC9316642/ /pubmed/35886044 http://dx.doi.org/10.3390/genes13071261 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Donghe
Kim, Woojin
An, Jahoon
Kim, Soriul
Lee, Seungku
Do, Ahra
Kim, Wonji
Lee, Sanghun
Yoon, Dankyu
Lee, Kwangbae
Ha, Seounguk
Silverman, Edwin K.
Cho, Michael
Shin, Chol
Won, Sungho
Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title_full Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title_fullStr Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title_full_unstemmed Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title_short Heritability Analyses Uncover Shared Genetic Effects of Lung Function and Change over Time
title_sort heritability analyses uncover shared genetic effects of lung function and change over time
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9316642/
https://www.ncbi.nlm.nih.gov/pubmed/35886044
http://dx.doi.org/10.3390/genes13071261
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