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Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice
Licorice has previously been shown to affect gene expression in cells; however, the underlying mechanisms remain to be clarified. We analyzed the microRNA expression profile of serum from mice treated by gavage with licorice decoction, and obtained 11 differentially expressed microRNAs (DEmiRNAs). W...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9317804/ https://www.ncbi.nlm.nih.gov/pubmed/35885926 http://dx.doi.org/10.3390/genes13071143 |
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author | Feng, Gang Liang, Guozheng Zhang, Yaqian Hu, Jicong Zhou, Chuandong Li, Jiawen Zhang, Wenfeng Shen, Han Wu, Fenglin Tao, Changli Liu, Yan Shao, Hongwei |
author_facet | Feng, Gang Liang, Guozheng Zhang, Yaqian Hu, Jicong Zhou, Chuandong Li, Jiawen Zhang, Wenfeng Shen, Han Wu, Fenglin Tao, Changli Liu, Yan Shao, Hongwei |
author_sort | Feng, Gang |
collection | PubMed |
description | Licorice has previously been shown to affect gene expression in cells; however, the underlying mechanisms remain to be clarified. We analyzed the microRNA expression profile of serum from mice treated by gavage with licorice decoction, and obtained 11 differentially expressed microRNAs (DEmiRNAs). We also screened differentially expressed genes (DEgenes) based on RNA-Seq data, and 271 common genes were identified by intersection analysis of the predicted target genes of 11 DEmiRNAs and the DEgenes. The miRNA–gene network showed that most of the hub genes were immune-related. KEGG enrichment analysis of the 271 genes identified three significant pathways, and the 21 genes involved in these three pathways, and the 11 DEmiRNAs, were constructed into a miRNA pathway–target gene network, in which mmu-miR-27a-3p stood out. Compared to ImmPort, there were 13 immune genes within the above group of 21 genes, and three intersected with the mmu-miR-27a-3p predicted target genes, Cd28, Grap2 and Cxcl12, of which the expression of Cd28 changed most significantly. We confirmed the regulation of Cd28 by mmu-miR-27a-3p using a dual-luciferase assay, and further confirmed that overexpression of mmu-miR-27a-3p could significantly downregulate the expression of Cd28 in lymphocytes. These results indicate that mmu-miR-27a-3p could be involved in the licorice-mediated regulation of the expression of Cd28 in mice. |
format | Online Article Text |
id | pubmed-9317804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93178042022-07-27 Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice Feng, Gang Liang, Guozheng Zhang, Yaqian Hu, Jicong Zhou, Chuandong Li, Jiawen Zhang, Wenfeng Shen, Han Wu, Fenglin Tao, Changli Liu, Yan Shao, Hongwei Genes (Basel) Article Licorice has previously been shown to affect gene expression in cells; however, the underlying mechanisms remain to be clarified. We analyzed the microRNA expression profile of serum from mice treated by gavage with licorice decoction, and obtained 11 differentially expressed microRNAs (DEmiRNAs). We also screened differentially expressed genes (DEgenes) based on RNA-Seq data, and 271 common genes were identified by intersection analysis of the predicted target genes of 11 DEmiRNAs and the DEgenes. The miRNA–gene network showed that most of the hub genes were immune-related. KEGG enrichment analysis of the 271 genes identified three significant pathways, and the 21 genes involved in these three pathways, and the 11 DEmiRNAs, were constructed into a miRNA pathway–target gene network, in which mmu-miR-27a-3p stood out. Compared to ImmPort, there were 13 immune genes within the above group of 21 genes, and three intersected with the mmu-miR-27a-3p predicted target genes, Cd28, Grap2 and Cxcl12, of which the expression of Cd28 changed most significantly. We confirmed the regulation of Cd28 by mmu-miR-27a-3p using a dual-luciferase assay, and further confirmed that overexpression of mmu-miR-27a-3p could significantly downregulate the expression of Cd28 in lymphocytes. These results indicate that mmu-miR-27a-3p could be involved in the licorice-mediated regulation of the expression of Cd28 in mice. MDPI 2022-06-25 /pmc/articles/PMC9317804/ /pubmed/35885926 http://dx.doi.org/10.3390/genes13071143 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Feng, Gang Liang, Guozheng Zhang, Yaqian Hu, Jicong Zhou, Chuandong Li, Jiawen Zhang, Wenfeng Shen, Han Wu, Fenglin Tao, Changli Liu, Yan Shao, Hongwei Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title | Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title_full | Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title_fullStr | Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title_full_unstemmed | Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title_short | Involvement of MicroRNA-27a-3p in the Licorice-Induced Alteration of Cd28 Expression in Mice |
title_sort | involvement of microrna-27a-3p in the licorice-induced alteration of cd28 expression in mice |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9317804/ https://www.ncbi.nlm.nih.gov/pubmed/35885926 http://dx.doi.org/10.3390/genes13071143 |
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