Cargando…
Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’
Anthocyanins are synthesized in the endoplasmic reticulum and then transported to the vacuole in plants. Glutathione S-transferases (GSTs) are thought to play a key role in anthocyanin transport. To clarify the mechanism of GST genes in the accumulation and transport of anthocyanin in the early frui...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9317864/ https://www.ncbi.nlm.nih.gov/pubmed/35887065 http://dx.doi.org/10.3390/ijms23147717 |
_version_ | 1784755160867667968 |
---|---|
author | Li, Hui Yang, Yaxin Li, Haoran Wang, Wu Zheng, Huan Tao, Jianmin |
author_facet | Li, Hui Yang, Yaxin Li, Haoran Wang, Wu Zheng, Huan Tao, Jianmin |
author_sort | Li, Hui |
collection | PubMed |
description | Anthocyanins are synthesized in the endoplasmic reticulum and then transported to the vacuole in plants. Glutathione S-transferases (GSTs) are thought to play a key role in anthocyanin transport. To clarify the mechanism of GST genes in the accumulation and transport of anthocyanin in the early fruit stage, we analyzed and characterized the GST family in the flesh of ‘Zhongshan-HongYu’ (ZS-HY) based on the transcriptome. In this study, the 92 GST genes identified through a comprehensive bioinformatics analysis were unevenly present in all chromosomes of grapes, except chromosomes 3, 9 and 10. Through the analysis of the chromosomal location, gene structure, conserved domains, phylogenetic relationships and cis-acting elements of GST family genes, the phylogenetic tree divided the GST genes into 9 subfamilies. Eighteen GST genes were screened and identified from grape berries via a transcriptome sequencing analysis, of which 4 belonged to the phi subfamily and 14 to the tau subfamily, and the expression levels of these GST genes were not tissue-specific. The phylogenetic analysis indicated that VvGST4 was closely related to PhAN9 and AtTT19. This study provides a foundation for the analysis of the GST gene family and insight into the roles of GSTs in grape anthocyanin transport. |
format | Online Article Text |
id | pubmed-9317864 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93178642022-07-27 Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ Li, Hui Yang, Yaxin Li, Haoran Wang, Wu Zheng, Huan Tao, Jianmin Int J Mol Sci Article Anthocyanins are synthesized in the endoplasmic reticulum and then transported to the vacuole in plants. Glutathione S-transferases (GSTs) are thought to play a key role in anthocyanin transport. To clarify the mechanism of GST genes in the accumulation and transport of anthocyanin in the early fruit stage, we analyzed and characterized the GST family in the flesh of ‘Zhongshan-HongYu’ (ZS-HY) based on the transcriptome. In this study, the 92 GST genes identified through a comprehensive bioinformatics analysis were unevenly present in all chromosomes of grapes, except chromosomes 3, 9 and 10. Through the analysis of the chromosomal location, gene structure, conserved domains, phylogenetic relationships and cis-acting elements of GST family genes, the phylogenetic tree divided the GST genes into 9 subfamilies. Eighteen GST genes were screened and identified from grape berries via a transcriptome sequencing analysis, of which 4 belonged to the phi subfamily and 14 to the tau subfamily, and the expression levels of these GST genes were not tissue-specific. The phylogenetic analysis indicated that VvGST4 was closely related to PhAN9 and AtTT19. This study provides a foundation for the analysis of the GST gene family and insight into the roles of GSTs in grape anthocyanin transport. MDPI 2022-07-13 /pmc/articles/PMC9317864/ /pubmed/35887065 http://dx.doi.org/10.3390/ijms23147717 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Li, Hui Yang, Yaxin Li, Haoran Wang, Wu Zheng, Huan Tao, Jianmin Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title | Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title_full | Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title_fullStr | Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title_full_unstemmed | Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title_short | Genome-Wide Identification of Glutathione S-Transferase and Expression Analysis in Response to Anthocyanin Transport in the Flesh of the New Teinturier Grape Germplasm ‘Zhongshan-HongYu’ |
title_sort | genome-wide identification of glutathione s-transferase and expression analysis in response to anthocyanin transport in the flesh of the new teinturier grape germplasm ‘zhongshan-hongyu’ |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9317864/ https://www.ncbi.nlm.nih.gov/pubmed/35887065 http://dx.doi.org/10.3390/ijms23147717 |
work_keys_str_mv | AT lihui genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu AT yangyaxin genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu AT lihaoran genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu AT wangwu genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu AT zhenghuan genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu AT taojianmin genomewideidentificationofglutathionestransferaseandexpressionanalysisinresponsetoanthocyanintransportinthefleshofthenewteinturiergrapegermplasmzhongshanhongyu |