Cargando…

Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming

In order to obtain a thermostable pectate lyase for ramie degumming, a rational design based on structural analysis was carried out on a novel pectate lyase (Pel419) derived from the Dickeya Dadantii DCE-01 for high-efficiency ramie degumming. A total of five potential amino acid sites were chosen t...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Huan, Feng, Xiangyuan, Yang, Qi, Zheng, Ke, Yi, Le, Duan, Shengwen, Cheng, Lifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318251/
https://www.ncbi.nlm.nih.gov/pubmed/35890653
http://dx.doi.org/10.3390/polym14142878
_version_ 1784755245569540096
author Xu, Huan
Feng, Xiangyuan
Yang, Qi
Zheng, Ke
Yi, Le
Duan, Shengwen
Cheng, Lifeng
author_facet Xu, Huan
Feng, Xiangyuan
Yang, Qi
Zheng, Ke
Yi, Le
Duan, Shengwen
Cheng, Lifeng
author_sort Xu, Huan
collection PubMed
description In order to obtain a thermostable pectate lyase for ramie degumming, a rational design based on structural analysis was carried out on a novel pectate lyase (Pel419) derived from the Dickeya Dadantii DCE-01 for high-efficiency ramie degumming. A total of five potential amino acid sites were chosen to replace residues. Then, the mutant enzymes were subjected to the heterologous expressions in Escherichia coli and their enzymatic characteristics were determined. The optimal reaction temperature for the five mutants kept consistent with that for the wild type. The enzyme activity and thermal stability of mutant V52A were significantly improved. Meanwhile, the weight loss rate obtained by V52A with the best enzymatic characteristics in the ramie degumming process at 50 °C is comparable with that obtained by commercial cotton-ramie processing pectinases, indicating that V52A was a potential industrial enzyme that could be applied to large-scale ramie degumming. In this study, the biological functions of conservative residues of Pel419 were preliminarily explored. The mutant V52A with both enzymatic activity and improved heat resistance was acquired, providing a superior material for developing enzyme preparations of ramie degumming, and rendering an effective method for the rational design aiming to improve the thermostability of pectate lyase.
format Online
Article
Text
id pubmed-9318251
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-93182512022-07-27 Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming Xu, Huan Feng, Xiangyuan Yang, Qi Zheng, Ke Yi, Le Duan, Shengwen Cheng, Lifeng Polymers (Basel) Article In order to obtain a thermostable pectate lyase for ramie degumming, a rational design based on structural analysis was carried out on a novel pectate lyase (Pel419) derived from the Dickeya Dadantii DCE-01 for high-efficiency ramie degumming. A total of five potential amino acid sites were chosen to replace residues. Then, the mutant enzymes were subjected to the heterologous expressions in Escherichia coli and their enzymatic characteristics were determined. The optimal reaction temperature for the five mutants kept consistent with that for the wild type. The enzyme activity and thermal stability of mutant V52A were significantly improved. Meanwhile, the weight loss rate obtained by V52A with the best enzymatic characteristics in the ramie degumming process at 50 °C is comparable with that obtained by commercial cotton-ramie processing pectinases, indicating that V52A was a potential industrial enzyme that could be applied to large-scale ramie degumming. In this study, the biological functions of conservative residues of Pel419 were preliminarily explored. The mutant V52A with both enzymatic activity and improved heat resistance was acquired, providing a superior material for developing enzyme preparations of ramie degumming, and rendering an effective method for the rational design aiming to improve the thermostability of pectate lyase. MDPI 2022-07-15 /pmc/articles/PMC9318251/ /pubmed/35890653 http://dx.doi.org/10.3390/polym14142878 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xu, Huan
Feng, Xiangyuan
Yang, Qi
Zheng, Ke
Yi, Le
Duan, Shengwen
Cheng, Lifeng
Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title_full Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title_fullStr Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title_full_unstemmed Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title_short Improvement on Thermostability of Pectate Lyase and Its Potential Application to Ramie Degumming
title_sort improvement on thermostability of pectate lyase and its potential application to ramie degumming
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318251/
https://www.ncbi.nlm.nih.gov/pubmed/35890653
http://dx.doi.org/10.3390/polym14142878
work_keys_str_mv AT xuhuan improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT fengxiangyuan improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT yangqi improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT zhengke improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT yile improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT duanshengwen improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming
AT chenglifeng improvementonthermostabilityofpectatelyaseanditspotentialapplicationtoramiedegumming