The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)

Aspidopterys concava is related to a group of important medicinal plants in Malpighiaceae in southeast Asia. Here, we report the first chloroplast genome fully sequenced and annotated for Aspidopterys concava. The genome size was 160,441 bp and contained a large single-copy (LSC) region of 71,434 bp...

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Autores principales: Huang, Songdian, Liu, Shinan, Liang, Xiaochun, Qin, Yonghua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318314/
https://www.ncbi.nlm.nih.gov/pubmed/35903305
http://dx.doi.org/10.1080/23802359.2022.2098853
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author Huang, Songdian
Liu, Shinan
Liang, Xiaochun
Qin, Yonghua
author_facet Huang, Songdian
Liu, Shinan
Liang, Xiaochun
Qin, Yonghua
author_sort Huang, Songdian
collection PubMed
description Aspidopterys concava is related to a group of important medicinal plants in Malpighiaceae in southeast Asia. Here, we report the first chloroplast genome fully sequenced and annotated for Aspidopterys concava. The genome size was 160,441 bp and contained a large single-copy (LSC) region of 71,434 bp, a small single-copy (SSC) region of 53,544 bp, and a pair of inverted repeats (IRs) regions of 8943 bp. Total GC content was 37.9%. It contained 125 genes in total, comprising 82 protein-coding genes, 37 transfer RNA genes, and six ribosomal RNA genes. Phylogenetic analysis showed that A. concava was the most closely related to A. obcordata from the same genus.
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spelling pubmed-93183142022-07-27 The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae) Huang, Songdian Liu, Shinan Liang, Xiaochun Qin, Yonghua Mitochondrial DNA B Resour Mitogenome Announcement Aspidopterys concava is related to a group of important medicinal plants in Malpighiaceae in southeast Asia. Here, we report the first chloroplast genome fully sequenced and annotated for Aspidopterys concava. The genome size was 160,441 bp and contained a large single-copy (LSC) region of 71,434 bp, a small single-copy (SSC) region of 53,544 bp, and a pair of inverted repeats (IRs) regions of 8943 bp. Total GC content was 37.9%. It contained 125 genes in total, comprising 82 protein-coding genes, 37 transfer RNA genes, and six ribosomal RNA genes. Phylogenetic analysis showed that A. concava was the most closely related to A. obcordata from the same genus. Taylor & Francis 2022-07-25 /pmc/articles/PMC9318314/ /pubmed/35903305 http://dx.doi.org/10.1080/23802359.2022.2098853 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Huang, Songdian
Liu, Shinan
Liang, Xiaochun
Qin, Yonghua
The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title_full The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title_fullStr The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title_short The complete chloroplast genome sequence of Aspidopterys concava (Wall.) A. Juss. (Malpighiaceae)
title_sort complete chloroplast genome sequence of aspidopterys concava (wall.) a. juss. (malpighiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318314/
https://www.ncbi.nlm.nih.gov/pubmed/35903305
http://dx.doi.org/10.1080/23802359.2022.2098853
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