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A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score©
Background: OncotypeDX Recurrence Score© (RS) is a commercially available 21-gene expression assay which estimates prognosis and guides chemoendocrine prescription in early-stage estrogen-receptor positive, human epidermal growth factor receptor-2-negative (ER+/HER2−) breast cancer. Limitations of R...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318604/ https://www.ncbi.nlm.nih.gov/pubmed/35887614 http://dx.doi.org/10.3390/jpm12071117 |
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author | Davey, Matthew G. Jalali, Amirhossein Ryan, Éanna J. McLaughlin, Ray P. Sweeney, Karl J. Barry, Michael K. Malone, Carmel M. Keane, Maccon M. Lowery, Aoife J. Miller, Nicola Kerin, Michael J. |
author_facet | Davey, Matthew G. Jalali, Amirhossein Ryan, Éanna J. McLaughlin, Ray P. Sweeney, Karl J. Barry, Michael K. Malone, Carmel M. Keane, Maccon M. Lowery, Aoife J. Miller, Nicola Kerin, Michael J. |
author_sort | Davey, Matthew G. |
collection | PubMed |
description | Background: OncotypeDX Recurrence Score© (RS) is a commercially available 21-gene expression assay which estimates prognosis and guides chemoendocrine prescription in early-stage estrogen-receptor positive, human epidermal growth factor receptor-2-negative (ER+/HER2−) breast cancer. Limitations of RS testing include the cost and turnaround time of several weeks. Aim: Our aim is to develop a user-friendly surrogate nomogram capable of predicting RS. Methods: Multivariable linear regression analyses were performed to determine predictors of RS and RS > 25. Receiver operating characteristic analysis produced an area under the curve (AUC) for each model, with training and test sets were composed of 70.3% (n = 315) and 29.7% (n = 133). A dynamic, user-friendly nomogram was built to predict RS using R (version 4.0.3). Results: 448 consecutive patients who underwent RS testing were included (median age: 58 years). Using multivariable regression analyses, postmenopausal status (β-Coefficient: 0.25, 95% confidence intervals (CIs): 0.03–0.48, p = 0.028), grade 3 disease (β-Coefficient: 0.28, 95% CIs: 0.03–0.52, p = 0.026), and estrogen receptor (ER) score (β-Coefficient: −0.14, 95% CIs: −0.22–−0.06, p = 0.001) all independently predicted RS, with AUC of 0.719. Using multivariable regression analyses, grade 3 disease (odds ratio (OR): 5.67, 95% CIs: 1.32–40.00, p = 0.037), decreased ER score (OR: 1.33, 95% CIs: 1.02–1.66, p = 0.050) and decreased progesterone receptor score (OR: 1.16, 95% CIs: 1.06–1.25, p = 0.002) all independently predicted RS > 25, with AUC of 0.740 for the static and dynamic online nomogram model. Conclusions: This study designed and validated an online user-friendly nomogram from routinely available clinicopathological parameters capable of predicting outcomes of the 21-gene RS expression assay. |
format | Online Article Text |
id | pubmed-9318604 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93186042022-07-27 A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© Davey, Matthew G. Jalali, Amirhossein Ryan, Éanna J. McLaughlin, Ray P. Sweeney, Karl J. Barry, Michael K. Malone, Carmel M. Keane, Maccon M. Lowery, Aoife J. Miller, Nicola Kerin, Michael J. J Pers Med Article Background: OncotypeDX Recurrence Score© (RS) is a commercially available 21-gene expression assay which estimates prognosis and guides chemoendocrine prescription in early-stage estrogen-receptor positive, human epidermal growth factor receptor-2-negative (ER+/HER2−) breast cancer. Limitations of RS testing include the cost and turnaround time of several weeks. Aim: Our aim is to develop a user-friendly surrogate nomogram capable of predicting RS. Methods: Multivariable linear regression analyses were performed to determine predictors of RS and RS > 25. Receiver operating characteristic analysis produced an area under the curve (AUC) for each model, with training and test sets were composed of 70.3% (n = 315) and 29.7% (n = 133). A dynamic, user-friendly nomogram was built to predict RS using R (version 4.0.3). Results: 448 consecutive patients who underwent RS testing were included (median age: 58 years). Using multivariable regression analyses, postmenopausal status (β-Coefficient: 0.25, 95% confidence intervals (CIs): 0.03–0.48, p = 0.028), grade 3 disease (β-Coefficient: 0.28, 95% CIs: 0.03–0.52, p = 0.026), and estrogen receptor (ER) score (β-Coefficient: −0.14, 95% CIs: −0.22–−0.06, p = 0.001) all independently predicted RS, with AUC of 0.719. Using multivariable regression analyses, grade 3 disease (odds ratio (OR): 5.67, 95% CIs: 1.32–40.00, p = 0.037), decreased ER score (OR: 1.33, 95% CIs: 1.02–1.66, p = 0.050) and decreased progesterone receptor score (OR: 1.16, 95% CIs: 1.06–1.25, p = 0.002) all independently predicted RS > 25, with AUC of 0.740 for the static and dynamic online nomogram model. Conclusions: This study designed and validated an online user-friendly nomogram from routinely available clinicopathological parameters capable of predicting outcomes of the 21-gene RS expression assay. MDPI 2022-07-08 /pmc/articles/PMC9318604/ /pubmed/35887614 http://dx.doi.org/10.3390/jpm12071117 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Davey, Matthew G. Jalali, Amirhossein Ryan, Éanna J. McLaughlin, Ray P. Sweeney, Karl J. Barry, Michael K. Malone, Carmel M. Keane, Maccon M. Lowery, Aoife J. Miller, Nicola Kerin, Michael J. A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title | A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title_full | A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title_fullStr | A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title_full_unstemmed | A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title_short | A Novel Surrogate Nomogram Capable of Predicting OncotypeDX Recurrence Score© |
title_sort | novel surrogate nomogram capable of predicting oncotypedx recurrence score© |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318604/ https://www.ncbi.nlm.nih.gov/pubmed/35887614 http://dx.doi.org/10.3390/jpm12071117 |
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