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Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov.
A new ascomycetous species of Parafenestella was isolated from Acer negundo during the survey of diseased trees in Southern Ontario, Canada. The species is morphologically similar to other taxa of Cucurbitariacea (Pleosporales). The new species is different from the extant species in the morphology...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318755/ https://www.ncbi.nlm.nih.gov/pubmed/35887487 http://dx.doi.org/10.3390/jof8070732 |
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author | Ilyukhin, Evgeny Markovskaja, Svetlana Elgorban, Abdallah M. Al-Rejaie, Salim S. Maharachchikumbura, Sajeewa S.N. |
author_facet | Ilyukhin, Evgeny Markovskaja, Svetlana Elgorban, Abdallah M. Al-Rejaie, Salim S. Maharachchikumbura, Sajeewa S.N. |
author_sort | Ilyukhin, Evgeny |
collection | PubMed |
description | A new ascomycetous species of Parafenestella was isolated from Acer negundo during the survey of diseased trees in Southern Ontario, Canada. The species is morphologically similar to other taxa of Cucurbitariacea (Pleosporales). The new species is different from the extant species in the morphology of ascospores, culture characteristics and molecular data. The novel species is described as Parafenestella ontariensis sp. nov. based on morphological and multi-gene phylogenetic analyses using a combined set of ITS, LSU, tef1 and tub2 loci. Additionally, the genome of P. ontariensis was sequenced and analyzed. The phylogenomic analysis confirmed the close relationship of the species to the fenestelloid clades of Cucurbitariaceae. The comparative genomics analysis revealed that the species lifestyle appears to be multitrophic (necrotrophic or hemi-biotrophic) with a capability to turn pathogenic on a corresponding plant host. |
format | Online Article Text |
id | pubmed-9318755 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93187552022-07-27 Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. Ilyukhin, Evgeny Markovskaja, Svetlana Elgorban, Abdallah M. Al-Rejaie, Salim S. Maharachchikumbura, Sajeewa S.N. J Fungi (Basel) Article A new ascomycetous species of Parafenestella was isolated from Acer negundo during the survey of diseased trees in Southern Ontario, Canada. The species is morphologically similar to other taxa of Cucurbitariacea (Pleosporales). The new species is different from the extant species in the morphology of ascospores, culture characteristics and molecular data. The novel species is described as Parafenestella ontariensis sp. nov. based on morphological and multi-gene phylogenetic analyses using a combined set of ITS, LSU, tef1 and tub2 loci. Additionally, the genome of P. ontariensis was sequenced and analyzed. The phylogenomic analysis confirmed the close relationship of the species to the fenestelloid clades of Cucurbitariaceae. The comparative genomics analysis revealed that the species lifestyle appears to be multitrophic (necrotrophic or hemi-biotrophic) with a capability to turn pathogenic on a corresponding plant host. MDPI 2022-07-14 /pmc/articles/PMC9318755/ /pubmed/35887487 http://dx.doi.org/10.3390/jof8070732 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ilyukhin, Evgeny Markovskaja, Svetlana Elgorban, Abdallah M. Al-Rejaie, Salim S. Maharachchikumbura, Sajeewa S.N. Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title | Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title_full | Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title_fullStr | Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title_full_unstemmed | Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title_short | Genomic Characteristics and Comparative Genomics Analysis of Parafenestella ontariensis sp. nov. |
title_sort | genomic characteristics and comparative genomics analysis of parafenestella ontariensis sp. nov. |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318755/ https://www.ncbi.nlm.nih.gov/pubmed/35887487 http://dx.doi.org/10.3390/jof8070732 |
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