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Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles

The ground state intermolecular potential of bimolecular complexes of N‐heterocycles is analyzed for the impact of individual terms in the interaction energy as provided by various, conceptually different theories. Novel combinations with several formulations of the electrostatic, Pauli repulsion, a...

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Autores principales: Barcza, Bónis, Szirmai, Ádám B., Szántó, Katalin J., Tajti, Attila, Szalay, Péter G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9321956/
https://www.ncbi.nlm.nih.gov/pubmed/35478353
http://dx.doi.org/10.1002/jcc.26866
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author Barcza, Bónis
Szirmai, Ádám B.
Szántó, Katalin J.
Tajti, Attila
Szalay, Péter G.
author_facet Barcza, Bónis
Szirmai, Ádám B.
Szántó, Katalin J.
Tajti, Attila
Szalay, Péter G.
author_sort Barcza, Bónis
collection PubMed
description The ground state intermolecular potential of bimolecular complexes of N‐heterocycles is analyzed for the impact of individual terms in the interaction energy as provided by various, conceptually different theories. Novel combinations with several formulations of the electrostatic, Pauli repulsion, and dispersion contributions are tested at both short‐ and long‐distance sides of the potential energy surface, for various alignments of the pyrrole dimer as well as the cytosine–uracil complex. The integration of a DFT/CCSD density embedding scheme, with dispersion terms from the effective fragment potential (EFP) method is found to provide good agreement with a reference CCSD(T) potential overall; simultaneously, a quantum mechanics/molecular mechanics approach using CHELPG atomic point charges for the electrostatic interaction, augmented by EFP dispersion and Pauli repulsion, comes also close to the reference result. Both schemes have the advantage of not relying on predefined force fields; rather, the interaction parameters can be determined for the system under study, thus being excellent candidates for ab initio modeling.
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spelling pubmed-93219562022-07-30 Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles Barcza, Bónis Szirmai, Ádám B. Szántó, Katalin J. Tajti, Attila Szalay, Péter G. J Comput Chem Research Articles The ground state intermolecular potential of bimolecular complexes of N‐heterocycles is analyzed for the impact of individual terms in the interaction energy as provided by various, conceptually different theories. Novel combinations with several formulations of the electrostatic, Pauli repulsion, and dispersion contributions are tested at both short‐ and long‐distance sides of the potential energy surface, for various alignments of the pyrrole dimer as well as the cytosine–uracil complex. The integration of a DFT/CCSD density embedding scheme, with dispersion terms from the effective fragment potential (EFP) method is found to provide good agreement with a reference CCSD(T) potential overall; simultaneously, a quantum mechanics/molecular mechanics approach using CHELPG atomic point charges for the electrostatic interaction, augmented by EFP dispersion and Pauli repulsion, comes also close to the reference result. Both schemes have the advantage of not relying on predefined force fields; rather, the interaction parameters can be determined for the system under study, thus being excellent candidates for ab initio modeling. John Wiley & Sons, Inc. 2022-04-28 2022-06-15 /pmc/articles/PMC9321956/ /pubmed/35478353 http://dx.doi.org/10.1002/jcc.26866 Text en © 2022 The Authors. Journal of Computational Chemistry published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Barcza, Bónis
Szirmai, Ádám B.
Szántó, Katalin J.
Tajti, Attila
Szalay, Péter G.
Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title_full Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title_fullStr Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title_full_unstemmed Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title_short Comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized N‐heterocycles
title_sort comparison of approximate intermolecular potentials for ab initio fragment calculations on medium sized n‐heterocycles
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9321956/
https://www.ncbi.nlm.nih.gov/pubmed/35478353
http://dx.doi.org/10.1002/jcc.26866
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