Cargando…

Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays

The dynamics of the cellular actomyosin cytoskeleton are crucial to many aspects of cellular function. Here, we describe techniques that employ active micropost array detectors (AMPADs) to measure cytoskeletal rheology and mechanical force fluctuations. The AMPADS are arrays of flexible poly(dimethy...

Descripción completa

Detalles Bibliográficos
Autores principales: Shi, Yu, Sivarajan, Shankar, Crocker, John C., Reich, Daniel H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9321978/
https://www.ncbi.nlm.nih.gov/pubmed/35612274
http://dx.doi.org/10.1002/cpz1.433
_version_ 1784756183730487296
author Shi, Yu
Sivarajan, Shankar
Crocker, John C.
Reich, Daniel H.
author_facet Shi, Yu
Sivarajan, Shankar
Crocker, John C.
Reich, Daniel H.
author_sort Shi, Yu
collection PubMed
description The dynamics of the cellular actomyosin cytoskeleton are crucial to many aspects of cellular function. Here, we describe techniques that employ active micropost array detectors (AMPADs) to measure cytoskeletal rheology and mechanical force fluctuations. The AMPADS are arrays of flexible poly(dimethylsiloxane) (PDMS) microposts with magnetic nanowires embedded in a subset of microposts to enable actuation of those posts via an externally applied magnetic field. Techniques are described to track the magnetic microposts’ motion with nanometer precision at up to 100 video frames per second to measure the local cellular rheology at well‐defined positions. Application of these high‐precision tracking techniques to the full array of microposts in contact with a cell also enables mapping of the cytoskeletal mechanical fluctuation dynamics with high spatial and temporal resolution. This article describes (1) the fabrication of magnetic micropost arrays, (2) measurement protocols for both local rheology and cytoskeletal force fluctuation mapping, and (3) special‐purpose software routines to reduce and analyze these data. © 2022 The Authors. Current Protocols published by Wiley Periodicals LLC. Basic Protocol 1: Fabrication of magnetic micropost arrays Basic Protocol 2: Data acquisition for cellular force fluctuations on non‐magnetic micropost arrays Basic Protocol 3: Data acquisition for local cellular rheology measurements with magnetic microposts Basic Protocol 4: Data reduction: determining microposts’ motion Basic Protocol 5: Data analysis: determining local rheology from magnetic microposts Basic Protocol 6: Data analysis for force fluctuation measurements Support Protocol 1: Fabrication of magnetic Ni nanowires by electrodeposition Support Protocol 2: Configuring Streampix for magnetic rheology measurements
format Online
Article
Text
id pubmed-9321978
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-93219782022-07-30 Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays Shi, Yu Sivarajan, Shankar Crocker, John C. Reich, Daniel H. Curr Protoc Protocol The dynamics of the cellular actomyosin cytoskeleton are crucial to many aspects of cellular function. Here, we describe techniques that employ active micropost array detectors (AMPADs) to measure cytoskeletal rheology and mechanical force fluctuations. The AMPADS are arrays of flexible poly(dimethylsiloxane) (PDMS) microposts with magnetic nanowires embedded in a subset of microposts to enable actuation of those posts via an externally applied magnetic field. Techniques are described to track the magnetic microposts’ motion with nanometer precision at up to 100 video frames per second to measure the local cellular rheology at well‐defined positions. Application of these high‐precision tracking techniques to the full array of microposts in contact with a cell also enables mapping of the cytoskeletal mechanical fluctuation dynamics with high spatial and temporal resolution. This article describes (1) the fabrication of magnetic micropost arrays, (2) measurement protocols for both local rheology and cytoskeletal force fluctuation mapping, and (3) special‐purpose software routines to reduce and analyze these data. © 2022 The Authors. Current Protocols published by Wiley Periodicals LLC. Basic Protocol 1: Fabrication of magnetic micropost arrays Basic Protocol 2: Data acquisition for cellular force fluctuations on non‐magnetic micropost arrays Basic Protocol 3: Data acquisition for local cellular rheology measurements with magnetic microposts Basic Protocol 4: Data reduction: determining microposts’ motion Basic Protocol 5: Data analysis: determining local rheology from magnetic microposts Basic Protocol 6: Data analysis for force fluctuation measurements Support Protocol 1: Fabrication of magnetic Ni nanowires by electrodeposition Support Protocol 2: Configuring Streampix for magnetic rheology measurements John Wiley and Sons Inc. 2022-05-25 2022-05 /pmc/articles/PMC9321978/ /pubmed/35612274 http://dx.doi.org/10.1002/cpz1.433 Text en © 2022 The Authors. Current Protocols published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Protocol
Shi, Yu
Sivarajan, Shankar
Crocker, John C.
Reich, Daniel H.
Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title_full Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title_fullStr Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title_full_unstemmed Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title_short Measuring Cytoskeletal Mechanical Fluctuations and Rheology with Active Micropost Arrays
title_sort measuring cytoskeletal mechanical fluctuations and rheology with active micropost arrays
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9321978/
https://www.ncbi.nlm.nih.gov/pubmed/35612274
http://dx.doi.org/10.1002/cpz1.433
work_keys_str_mv AT shiyu measuringcytoskeletalmechanicalfluctuationsandrheologywithactivemicropostarrays
AT sivarajanshankar measuringcytoskeletalmechanicalfluctuationsandrheologywithactivemicropostarrays
AT crockerjohnc measuringcytoskeletalmechanicalfluctuationsandrheologywithactivemicropostarrays
AT reichdanielh measuringcytoskeletalmechanicalfluctuationsandrheologywithactivemicropostarrays