Cargando…
Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9
In nature, aldehyde dehydrogenase (ALDH) is widely distributed and mainly involved in the oxidation of aldehydes. Thermostability is one of the key features for industrial enzymes. The ability of enzymes to withstand a high operating temperature offers many advantages, including enhancing productivi...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322625/ https://www.ncbi.nlm.nih.gov/pubmed/35889163 http://dx.doi.org/10.3390/microorganisms10071444 |
_version_ | 1784756350929076224 |
---|---|
author | Rosli, Nur Ezzati Ali, Mohd Shukuri Mohamad Kamarudin, Nor Hafizah Ahmad Masomian, Malihe Latip, Wahhida Saadon, Shazleen Rahman, Raja Noor Zaliha Raja Abd |
author_facet | Rosli, Nur Ezzati Ali, Mohd Shukuri Mohamad Kamarudin, Nor Hafizah Ahmad Masomian, Malihe Latip, Wahhida Saadon, Shazleen Rahman, Raja Noor Zaliha Raja Abd |
author_sort | Rosli, Nur Ezzati |
collection | PubMed |
description | In nature, aldehyde dehydrogenase (ALDH) is widely distributed and mainly involved in the oxidation of aldehydes. Thermostability is one of the key features for industrial enzymes. The ability of enzymes to withstand a high operating temperature offers many advantages, including enhancing productivity in industries. This study was conducted to understand the structural and biochemical features of ALDH from thermophilic bacterium, Anoxybacillus geothermalis strain D9. The 3D structure of A. geothermalis ALDH was predicted by YASARA software and composed of 24.3% β-sheet located at the center core region. The gene, which encodes 504 amino acids with a molecular weight of ~56 kDa, was cloned into pET51b(+) and expressed in E.coli Transetta (DE3). The purified A. geothermalis ALDH showed remarkable thermostability with optimum temperature at 60 °C and stable at 70 °C for 1 h. The melting point of the A. geothermalis ALDH is at 65.9 °C. Metal ions such as Fe(3+) ions inhibited the enzyme activity, while Li(+) and Mg(2+) enhanced by 38.83% and 105.83%, respectively. Additionally, this enzyme showed tolerance to most non-polar organic solvents tested (xylene, n-dedocane, n-tetradecane, n-hexadecane) in a concentration of 25% v/v. These findings have generally improved the understanding of thermostable A. geothermalis ALDH so it can be widely used in the industry. |
format | Online Article Text |
id | pubmed-9322625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93226252022-07-27 Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 Rosli, Nur Ezzati Ali, Mohd Shukuri Mohamad Kamarudin, Nor Hafizah Ahmad Masomian, Malihe Latip, Wahhida Saadon, Shazleen Rahman, Raja Noor Zaliha Raja Abd Microorganisms Article In nature, aldehyde dehydrogenase (ALDH) is widely distributed and mainly involved in the oxidation of aldehydes. Thermostability is one of the key features for industrial enzymes. The ability of enzymes to withstand a high operating temperature offers many advantages, including enhancing productivity in industries. This study was conducted to understand the structural and biochemical features of ALDH from thermophilic bacterium, Anoxybacillus geothermalis strain D9. The 3D structure of A. geothermalis ALDH was predicted by YASARA software and composed of 24.3% β-sheet located at the center core region. The gene, which encodes 504 amino acids with a molecular weight of ~56 kDa, was cloned into pET51b(+) and expressed in E.coli Transetta (DE3). The purified A. geothermalis ALDH showed remarkable thermostability with optimum temperature at 60 °C and stable at 70 °C for 1 h. The melting point of the A. geothermalis ALDH is at 65.9 °C. Metal ions such as Fe(3+) ions inhibited the enzyme activity, while Li(+) and Mg(2+) enhanced by 38.83% and 105.83%, respectively. Additionally, this enzyme showed tolerance to most non-polar organic solvents tested (xylene, n-dedocane, n-tetradecane, n-hexadecane) in a concentration of 25% v/v. These findings have generally improved the understanding of thermostable A. geothermalis ALDH so it can be widely used in the industry. MDPI 2022-07-18 /pmc/articles/PMC9322625/ /pubmed/35889163 http://dx.doi.org/10.3390/microorganisms10071444 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Rosli, Nur Ezzati Ali, Mohd Shukuri Mohamad Kamarudin, Nor Hafizah Ahmad Masomian, Malihe Latip, Wahhida Saadon, Shazleen Rahman, Raja Noor Zaliha Raja Abd Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title | Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title_full | Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title_fullStr | Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title_full_unstemmed | Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title_short | Structure Prediction and Characterization of Thermostable Aldehyde Dehydrogenase from Newly Isolated Anoxybacillus geothermalis Strain D9 |
title_sort | structure prediction and characterization of thermostable aldehyde dehydrogenase from newly isolated anoxybacillus geothermalis strain d9 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322625/ https://www.ncbi.nlm.nih.gov/pubmed/35889163 http://dx.doi.org/10.3390/microorganisms10071444 |
work_keys_str_mv | AT roslinurezzati structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT alimohdshukurimohamad structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT kamarudinnorhafizahahmad structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT masomianmalihe structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT latipwahhida structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT saadonshazleen structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 AT rahmanrajanoorzaliharajaabd structurepredictionandcharacterizationofthermostablealdehydedehydrogenasefromnewlyisolatedanoxybacillusgeothermalisstraind9 |