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Generalizing the Aromatic δ‐Amino Acid Foldamer Helix

A series of aromatic oligoamide foldamer sequences containing different proportions of three δ‐amino acids derived from quinoline, pyridine, and benzene and possessing varying flexibility, for example due to methylene bridges, were synthesized. Crystallographic structures of two key sequences and (1...

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Detalles Bibliográficos
Autores principales: Bindl, Daniel, Mandal, Pradeep K., Huc, Ivan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322652/
https://www.ncbi.nlm.nih.gov/pubmed/35332956
http://dx.doi.org/10.1002/chem.202200538
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author Bindl, Daniel
Mandal, Pradeep K.
Huc, Ivan
author_facet Bindl, Daniel
Mandal, Pradeep K.
Huc, Ivan
author_sort Bindl, Daniel
collection PubMed
description A series of aromatic oligoamide foldamer sequences containing different proportions of three δ‐amino acids derived from quinoline, pyridine, and benzene and possessing varying flexibility, for example due to methylene bridges, were synthesized. Crystallographic structures of two key sequences and (1)H NMR data in water concur to show that a canonical aromatic helix fold prevails in almost all cases and that helix stability critically depends on the ratio between rigid and flexible units. Notwithstanding subtle variations of curvature, i. e. the numbers of units per turn, the aromatic δ‐peptide helix is therefore shown to be general and tolerant of a great number of sp(3) centers. We also demonstrate canonical helical folding upon alternating two monomers that do not promote folding when taken separately: folding occurs with two methylenes between every other unit, not with one methylene between every unit. These findings highlight that a fine‐tuning of helix handedness inversion kinetics, curvature, and side chain positioning in aromatic δ‐peptidic foldamers can be realized by systematically combining different yet compatible δ‐amino acids.
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spelling pubmed-93226522022-07-30 Generalizing the Aromatic δ‐Amino Acid Foldamer Helix Bindl, Daniel Mandal, Pradeep K. Huc, Ivan Chemistry Research Articles A series of aromatic oligoamide foldamer sequences containing different proportions of three δ‐amino acids derived from quinoline, pyridine, and benzene and possessing varying flexibility, for example due to methylene bridges, were synthesized. Crystallographic structures of two key sequences and (1)H NMR data in water concur to show that a canonical aromatic helix fold prevails in almost all cases and that helix stability critically depends on the ratio between rigid and flexible units. Notwithstanding subtle variations of curvature, i. e. the numbers of units per turn, the aromatic δ‐peptide helix is therefore shown to be general and tolerant of a great number of sp(3) centers. We also demonstrate canonical helical folding upon alternating two monomers that do not promote folding when taken separately: folding occurs with two methylenes between every other unit, not with one methylene between every unit. These findings highlight that a fine‐tuning of helix handedness inversion kinetics, curvature, and side chain positioning in aromatic δ‐peptidic foldamers can be realized by systematically combining different yet compatible δ‐amino acids. John Wiley and Sons Inc. 2022-04-13 2022-06-01 /pmc/articles/PMC9322652/ /pubmed/35332956 http://dx.doi.org/10.1002/chem.202200538 Text en © 2022 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Bindl, Daniel
Mandal, Pradeep K.
Huc, Ivan
Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title_full Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title_fullStr Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title_full_unstemmed Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title_short Generalizing the Aromatic δ‐Amino Acid Foldamer Helix
title_sort generalizing the aromatic δ‐amino acid foldamer helix
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322652/
https://www.ncbi.nlm.nih.gov/pubmed/35332956
http://dx.doi.org/10.1002/chem.202200538
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