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Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction
The estimation of the Individual Treatment Effect (ITE) on survival time is an important research topic in clinics-based causal inference. Various representation learning methods have been proposed to deal with its three key problems, i.e., reducing selection bias, handling censored survival data, a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322711/ https://www.ncbi.nlm.nih.gov/pubmed/35885198 http://dx.doi.org/10.3390/e24070975 |
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author | Zhao, Yijie Zhou, Hao Gu, Jin Ye, Hao |
author_facet | Zhao, Yijie Zhou, Hao Gu, Jin Ye, Hao |
author_sort | Zhao, Yijie |
collection | PubMed |
description | The estimation of the Individual Treatment Effect (ITE) on survival time is an important research topic in clinics-based causal inference. Various representation learning methods have been proposed to deal with its three key problems, i.e., reducing selection bias, handling censored survival data, and avoiding balancing non-confounders. However, none of them consider all three problems in a single method. In this study, by combining the Counterfactual Survival Analysis (CSA) model and Dragonnet from the literature, we first propose a CSA–Dragonnet to deal with the three problems simultaneously. Moreover, we found that conclusions from traditional Randomized Controlled Trials (RCTs) or Retrospective Cohort Studies (RCSs) can offer valuable bound information to the counterfactual learning of ITE, which has never been used by existing ITE estimation methods. Hence, we further propose a CSA–Dragonnet with Embedded Prior Knowledge (CDNEPK) by formulating a unified expression of the prior knowledge given by RCTs or RCSs, inserting counterfactual prediction nets into CSA–Dragonnet and defining loss items based on the bounds for the ITE extracted from prior knowledge. Semi-synthetic data experiments showed that CDNEPK has superior performance. Real-world experiments indicated that CDNEPK can offer meaningful treatment advice. |
format | Online Article Text |
id | pubmed-9322711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-93227112022-07-27 Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction Zhao, Yijie Zhou, Hao Gu, Jin Ye, Hao Entropy (Basel) Article The estimation of the Individual Treatment Effect (ITE) on survival time is an important research topic in clinics-based causal inference. Various representation learning methods have been proposed to deal with its three key problems, i.e., reducing selection bias, handling censored survival data, and avoiding balancing non-confounders. However, none of them consider all three problems in a single method. In this study, by combining the Counterfactual Survival Analysis (CSA) model and Dragonnet from the literature, we first propose a CSA–Dragonnet to deal with the three problems simultaneously. Moreover, we found that conclusions from traditional Randomized Controlled Trials (RCTs) or Retrospective Cohort Studies (RCSs) can offer valuable bound information to the counterfactual learning of ITE, which has never been used by existing ITE estimation methods. Hence, we further propose a CSA–Dragonnet with Embedded Prior Knowledge (CDNEPK) by formulating a unified expression of the prior knowledge given by RCTs or RCSs, inserting counterfactual prediction nets into CSA–Dragonnet and defining loss items based on the bounds for the ITE extracted from prior knowledge. Semi-synthetic data experiments showed that CDNEPK has superior performance. Real-world experiments indicated that CDNEPK can offer meaningful treatment advice. MDPI 2022-07-14 /pmc/articles/PMC9322711/ /pubmed/35885198 http://dx.doi.org/10.3390/e24070975 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhao, Yijie Zhou, Hao Gu, Jin Ye, Hao Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title | Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title_full | Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title_fullStr | Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title_full_unstemmed | Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title_short | Estimating the Individual Treatment Effect on Survival Time Based on Prior Knowledge and Counterfactual Prediction |
title_sort | estimating the individual treatment effect on survival time based on prior knowledge and counterfactual prediction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9322711/ https://www.ncbi.nlm.nih.gov/pubmed/35885198 http://dx.doi.org/10.3390/e24070975 |
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