Cargando…

Nucleosome-Omics: A Perspective on the Epigenetic Code and 3D Genome Landscape

Genetic information is loaded on chromatin, which involves DNA sequence arrangement and the epigenetic landscape. The epigenetic information including DNA methylation, nucleosome positioning, histone modification, 3D chromatin conformation, and so on, has a crucial impact on gene transcriptional reg...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kong, Siyuan, Lu, Yuhui, Tan, Shuhao, Li, Rongrong, Gao, Yan, Li, Kui, Zhang, Yubo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Review
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9323251/ https://www.ncbi.nlm.nih.gov/pubmed/35885897 http://dx.doi.org/10.3390/genes13071114

Ejemplares similares

Single-cell omics: A new direction for functional genetic research in human diseases and animal models
por: Kong, Siyuan, et al.
Publicado: (2023)

Nucleosomal signatures impose nucleosome positioning in coding and noncoding sequences in the genome
por: González, Sara, et al.
Publicado: (2016)

The coexistence of the nucleosome positioning code with the genetic code on eukaryotic genomes
por: Cohanim, Amir B., et al.
Publicado: (2009)

An integrated -omics analysis of the epigenetic landscape of gene expression in human blood cells
por: Kennedy, Elizabeth M., et al.
Publicado: (2018)

The Multiple Myeloma Landscape: Epigenetics and Non-Coding RNAs
por: Coira, Isabel F., et al.
Publicado: (2022)

The interaction landscape between transcription factors and the nucleosome
por: Zhu, Fangjie, et al.
Publicado: (2018)

Circulating nucleosomes as epigenetic biomarkers in pancreatic cancer
por: Bauden, Monika, et al.
Publicado: (2015)

The Impact of the Nucleosome Code on Protein-Coding Sequence Evolution in Yeast
por: Warnecke, Tobias, et al.
Publicado: (2008)

The Epigenetic Landscape of Vascular Calcification: An Integrative Perspective
por: Hou, Yi-Chou, et al.
Publicado: (2020)

Replication stress affects the fidelity of nucleosome-mediated epigenetic inheritance
por: Li, Wenzhu, et al.
Publicado: (2017)

Nucleosome destabilization by nuclear non-coding RNAs
por: Fujita, Risa, et al.
Publicado: (2020)

Liquid phase condensation directs nucleosome epigenetic modifications
por: Yang, Yi, et al.
Publicado: (2020)

The kinetic landscape of nucleosome assembly: A coarse-grained molecular dynamics study
por: Brandani, Giovanni B., et al.
Publicado: (2021)

Clustered regulatory elements at nucleosome-depleted regions punctuate a constant nucleosomal landscape in Schizosaccharomyces pombe
por: Soriano, Ignacio, et al.
Publicado: (2013)

Osteosarcoma Multi-Omics Landscape and Subtypes
por: Tang, Shan, et al.
Publicado: (2023)

NUCOME: A comprehensive database of nucleosome organization referenced landscapes in mammalian genomes
por: Chen, Xiaolan, et al.
Publicado: (2021)

The epigenetic landscape of age-related diseases: the geroscience perspective
por: Gensous, Noémie, et al.
Publicado: (2017)

The trans-omics landscape of COVID-19
por: Wu, Peng, et al.
Publicado: (2021)

Nucleosome deposition and DNA methylation at coding region boundaries
por: Choi, Jung Kyoon, et al.
Publicado: (2009)

A Comprehensive View of the Epigenetic Landscape. Part II: Histone Post-translational Modification, Nucleosome Level, and Chromatin Regulation by ncRNAs
por: Sadakierska-Chudy, Anna, et al.
Publicado: (2014)

Altered epigenetic features in circulating nucleosomes in idiopathic pulmonary fibrosis
por: Guiot, J., et al.
Publicado: (2017)

A novel proteomics approach to epigenetic profiling of circulating nucleosomes
por: Van den Ackerveken, Priscilla, et al.
Publicado: (2021)

Dynamic nucleosome landscape elicits a noncanonical GATA2 pioneer model
por: Li, Tianbao, et al.
Publicado: (2022)

Epigenetic Landscape Is Largely Shaped by Diversiform Transposons in Aegilops tauschii
por: Kong, Chuizheng, et al.
Publicado: (2023)

Characterizing nucleosome dynamics from genomic and epigenetic information using rule induction learning
por: Le, Ngoc Tu, et al.
Publicado: (2009)

Nucleosome landscape reflects phenotypic differences in Trypanosoma cruzi life forms
por: Lima, Alex R. J., et al.
Publicado: (2021)

Omics Landscape in Disease Biomarkers Discovery
por: Neagu, Monica, et al.
Publicado: (2016)

The omics approach to bee nutritional landscape
por: Chakrabarti, Priyadarshini, et al.
Publicado: (2019)

Extending the landscape of omics technologies by pathomics
por: Bülow, Roman D., et al.
Publicado: (2023)

Chromatin 'programming' by sequence - is there more to the nucleosome code than %GC?
por: Hughes, Amanda, et al.
Publicado: (2009)

Widespread remodeling of mid-coding sequence nucleosomes by Isw1
por: Tirosh, Itay, et al.
Publicado: (2010)

Promoter nucleosome dynamics regulated by signalling through the CTD code
por: Materne, Philippe, et al.
Publicado: (2015)

Multiplexing Genetic and Nucleosome Positioning Codes: A Computational Approach
por: Eslami-Mossallam, Behrouz, et al.
Publicado: (2016)

Molecular Characterization and Landscape of Breast cancer Models from a multi-omics Perspective
por: Ortiz, Mylena M.O., et al.
Publicado: (2023)

Quantifying epigenetic modulation of nucleosome breathing by high-throughput AFM imaging
por: Konrad, Sebastian F., et al.
Publicado: (2022)

Promising landscape for regulating macrophage polarization: epigenetic viewpoint
por: Zhou, Dexi, et al.
Publicado: (2017)

Integrated omics analysis reveals the epigenetic mechanism of visceral hypersensitivity in IBS-D
por: Lu, Yaoyao, et al.
Publicado: (2023)

Evolutionary insights into 3D genome organization and epigenetic landscape of Vigna mungo
por: Junaid, Alim, et al.
Publicado: (2023)

DNA-guided establishment of nucleosome patterns within coding regions of a eukaryotic genome
por: Beh, Leslie Y., et al.
Publicado: (2015)

OMICs, Epigenetics, and Genome Editing Techniques for Food and Nutritional Security
por: Gogolev, Yuri V., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_m6b7vrsba3p4a00dfefkqje2s3