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Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla
PURPOSE: To propose a novel deep learning (DL) approach to transmit‐B(1) (B(1) (+))‐artifact mitigation without direct use of parallel transmission (pTx), by predicting pTx images from single‐channel transmission (sTx) images. METHODS: A deep encoder–decoder convolutional neural network was construc...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9324974/ https://www.ncbi.nlm.nih.gov/pubmed/35403237 http://dx.doi.org/10.1002/mrm.29238 |
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author | Ma, Xiaodong Uğurbil, Kâmil Wu, Xiaoping |
author_facet | Ma, Xiaodong Uğurbil, Kâmil Wu, Xiaoping |
author_sort | Ma, Xiaodong |
collection | PubMed |
description | PURPOSE: To propose a novel deep learning (DL) approach to transmit‐B(1) (B(1) (+))‐artifact mitigation without direct use of parallel transmission (pTx), by predicting pTx images from single‐channel transmission (sTx) images. METHODS: A deep encoder–decoder convolutional neural network was constructed and trained to learn the mapping from sTx to pTx images. The feasibility was demonstrated using 7 T Human‐Connectome Project (HCP)‐style diffusion MRI. The training dataset comprised images acquired on 5 healthy subjects using commercial Nova RF coils. Relevant hyperparameters were tuned with a nested cross‐validation, and the generalization performance evaluated using a regular cross‐validation. RESULTS: Our DL method effectively improved the image quality for sTx images by restoring the signal dropout, with quality measures (including normalized root‐mean‐square error, peak SNR, and structural similarity index measure) improved in most brain regions. The improved image quality was translated into improved performances for diffusion tensor imaging analysis; our method improved accuracy for fractional anisotropy and mean diffusivity estimations, reduced the angular errors of principal eigenvectors, and improved the fiber orientation delineation relative to sTx images. Moreover, the final DL model trained on data of all 5 subjects was successfully used to predict pTx images for unseen new subjects (randomly selected from the 7 T HCP database), effectively recovering the signal dropout and improving color‐coded fractional anisotropy maps with largely reduced noise levels. CONCLUSION: The proposed DL method has potential to provide images with reduced B1(+) artifacts in healthy subjects even when pTx resources are inaccessible on the user side. |
format | Online Article Text |
id | pubmed-9324974 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93249742022-07-30 Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla Ma, Xiaodong Uğurbil, Kâmil Wu, Xiaoping Magn Reson Med Research Articles–Imaging Methodology PURPOSE: To propose a novel deep learning (DL) approach to transmit‐B(1) (B(1) (+))‐artifact mitigation without direct use of parallel transmission (pTx), by predicting pTx images from single‐channel transmission (sTx) images. METHODS: A deep encoder–decoder convolutional neural network was constructed and trained to learn the mapping from sTx to pTx images. The feasibility was demonstrated using 7 T Human‐Connectome Project (HCP)‐style diffusion MRI. The training dataset comprised images acquired on 5 healthy subjects using commercial Nova RF coils. Relevant hyperparameters were tuned with a nested cross‐validation, and the generalization performance evaluated using a regular cross‐validation. RESULTS: Our DL method effectively improved the image quality for sTx images by restoring the signal dropout, with quality measures (including normalized root‐mean‐square error, peak SNR, and structural similarity index measure) improved in most brain regions. The improved image quality was translated into improved performances for diffusion tensor imaging analysis; our method improved accuracy for fractional anisotropy and mean diffusivity estimations, reduced the angular errors of principal eigenvectors, and improved the fiber orientation delineation relative to sTx images. Moreover, the final DL model trained on data of all 5 subjects was successfully used to predict pTx images for unseen new subjects (randomly selected from the 7 T HCP database), effectively recovering the signal dropout and improving color‐coded fractional anisotropy maps with largely reduced noise levels. CONCLUSION: The proposed DL method has potential to provide images with reduced B1(+) artifacts in healthy subjects even when pTx resources are inaccessible on the user side. John Wiley and Sons Inc. 2022-04-10 2022-08 /pmc/articles/PMC9324974/ /pubmed/35403237 http://dx.doi.org/10.1002/mrm.29238 Text en © 2022 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Research Articles–Imaging Methodology Ma, Xiaodong Uğurbil, Kâmil Wu, Xiaoping Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title | Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title_full | Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title_fullStr | Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title_full_unstemmed | Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title_short | Mitigating transmit‐B(1) artifacts by predicting parallel transmission images with deep learning: A feasibility study using high‐resolution whole‐brain diffusion at 7 Tesla |
title_sort | mitigating transmit‐b(1) artifacts by predicting parallel transmission images with deep learning: a feasibility study using high‐resolution whole‐brain diffusion at 7 tesla |
topic | Research Articles–Imaging Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9324974/ https://www.ncbi.nlm.nih.gov/pubmed/35403237 http://dx.doi.org/10.1002/mrm.29238 |
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