Cargando…

Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction

Mixed lipid micelles were proposed to facilitate life through their documented growth dynamics and catalytic properties. Our previous research predicted that micellar self-reproduction involves catalyzed accretion of lipid molecules by the residing lipids, leading to compositional homeostasis. Here,...

Descripción completa

Detalles Bibliográficos
Autores principales: Kahana, Amit, Lancet, Doron, Palmai, Zoltan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9325298/
https://www.ncbi.nlm.nih.gov/pubmed/35888044
http://dx.doi.org/10.3390/life12070955
_version_ 1784757015513399296
author Kahana, Amit
Lancet, Doron
Palmai, Zoltan
author_facet Kahana, Amit
Lancet, Doron
Palmai, Zoltan
author_sort Kahana, Amit
collection PubMed
description Mixed lipid micelles were proposed to facilitate life through their documented growth dynamics and catalytic properties. Our previous research predicted that micellar self-reproduction involves catalyzed accretion of lipid molecules by the residing lipids, leading to compositional homeostasis. Here, we employ atomistic Molecular Dynamics simulations, beginning with 54 lipid monomers, tracking an entire course of micellar accretion. This was done to examine the self-assembly of variegated lipid clusters, allowing us to measure entry and exit rates of monomeric lipids into pre-micelles with different compositions and sizes. We observe considerable rate-modifications that depend on the assembly composition and scrutinize the underlying mechanisms as well as the energy contributions. Lastly, we describe the measured potential for compositional homeostasis in our simulated mixed micelles. This affirms the basis for micellar self-reproduction, with implications for the study of the origin of life.
format Online
Article
Text
id pubmed-9325298
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-93252982022-07-27 Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction Kahana, Amit Lancet, Doron Palmai, Zoltan Life (Basel) Article Mixed lipid micelles were proposed to facilitate life through their documented growth dynamics and catalytic properties. Our previous research predicted that micellar self-reproduction involves catalyzed accretion of lipid molecules by the residing lipids, leading to compositional homeostasis. Here, we employ atomistic Molecular Dynamics simulations, beginning with 54 lipid monomers, tracking an entire course of micellar accretion. This was done to examine the self-assembly of variegated lipid clusters, allowing us to measure entry and exit rates of monomeric lipids into pre-micelles with different compositions and sizes. We observe considerable rate-modifications that depend on the assembly composition and scrutinize the underlying mechanisms as well as the energy contributions. Lastly, we describe the measured potential for compositional homeostasis in our simulated mixed micelles. This affirms the basis for micellar self-reproduction, with implications for the study of the origin of life. MDPI 2022-06-24 /pmc/articles/PMC9325298/ /pubmed/35888044 http://dx.doi.org/10.3390/life12070955 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kahana, Amit
Lancet, Doron
Palmai, Zoltan
Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title_full Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title_fullStr Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title_full_unstemmed Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title_short Micellar Composition Affects Lipid Accretion Kinetics in Molecular Dynamics Simulations: Support for Lipid Network Reproduction
title_sort micellar composition affects lipid accretion kinetics in molecular dynamics simulations: support for lipid network reproduction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9325298/
https://www.ncbi.nlm.nih.gov/pubmed/35888044
http://dx.doi.org/10.3390/life12070955
work_keys_str_mv AT kahanaamit micellarcompositionaffectslipidaccretionkineticsinmoleculardynamicssimulationssupportforlipidnetworkreproduction
AT lancetdoron micellarcompositionaffectslipidaccretionkineticsinmoleculardynamicssimulationssupportforlipidnetworkreproduction
AT palmaizoltan micellarcompositionaffectslipidaccretionkineticsinmoleculardynamicssimulationssupportforlipidnetworkreproduction