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Daily Reports on Phage-Host Interactions
Understanding phage-host relationships is crucial for the study of virus biology and the application of phages in biotechnology and medicine. However, information concerning the range of hosts for bacterial and archaeal viruses is scattered across numerous databases and is difficult to obtain. There...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329054/ https://www.ncbi.nlm.nih.gov/pubmed/35910653 http://dx.doi.org/10.3389/fmicb.2022.946070 |
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author | Albrycht, Kamil Rynkiewicz, Adam A. Harasymczuk, Michal Barylski, Jakub Zielezinski, Andrzej |
author_facet | Albrycht, Kamil Rynkiewicz, Adam A. Harasymczuk, Michal Barylski, Jakub Zielezinski, Andrzej |
author_sort | Albrycht, Kamil |
collection | PubMed |
description | Understanding phage-host relationships is crucial for the study of virus biology and the application of phages in biotechnology and medicine. However, information concerning the range of hosts for bacterial and archaeal viruses is scattered across numerous databases and is difficult to obtain. Therefore, here we present PHD (Phage & Host Daily), a web application that offers a comprehensive, up-to-date catalog of known phage-host associations that allows users to select viruses targeting specific bacterial and archaeal taxa of interest. Our service combines the latest information on virus-host interactions from seven source databases with current taxonomic classification retrieved directly from the groups and institutions responsible for its maintenance. The web application also provides summary statistics on host and virus diversity, their pairwise interactions, and the host range of deposited phages. PHD is updated daily and available at http://phdaily.info or http://combio.pl/phdaily. |
format | Online Article Text |
id | pubmed-9329054 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93290542022-07-29 Daily Reports on Phage-Host Interactions Albrycht, Kamil Rynkiewicz, Adam A. Harasymczuk, Michal Barylski, Jakub Zielezinski, Andrzej Front Microbiol Microbiology Understanding phage-host relationships is crucial for the study of virus biology and the application of phages in biotechnology and medicine. However, information concerning the range of hosts for bacterial and archaeal viruses is scattered across numerous databases and is difficult to obtain. Therefore, here we present PHD (Phage & Host Daily), a web application that offers a comprehensive, up-to-date catalog of known phage-host associations that allows users to select viruses targeting specific bacterial and archaeal taxa of interest. Our service combines the latest information on virus-host interactions from seven source databases with current taxonomic classification retrieved directly from the groups and institutions responsible for its maintenance. The web application also provides summary statistics on host and virus diversity, their pairwise interactions, and the host range of deposited phages. PHD is updated daily and available at http://phdaily.info or http://combio.pl/phdaily. Frontiers Media S.A. 2022-07-14 /pmc/articles/PMC9329054/ /pubmed/35910653 http://dx.doi.org/10.3389/fmicb.2022.946070 Text en Copyright © 2022 Albrycht, Rynkiewicz, Harasymczuk, Barylski and Zielezinski. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Albrycht, Kamil Rynkiewicz, Adam A. Harasymczuk, Michal Barylski, Jakub Zielezinski, Andrzej Daily Reports on Phage-Host Interactions |
title | Daily Reports on Phage-Host Interactions |
title_full | Daily Reports on Phage-Host Interactions |
title_fullStr | Daily Reports on Phage-Host Interactions |
title_full_unstemmed | Daily Reports on Phage-Host Interactions |
title_short | Daily Reports on Phage-Host Interactions |
title_sort | daily reports on phage-host interactions |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329054/ https://www.ncbi.nlm.nih.gov/pubmed/35910653 http://dx.doi.org/10.3389/fmicb.2022.946070 |
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