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Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus

Missions to detect extraterrestrial life are being designed to visit Europa and Enceladus in the next decades. The contact between the mission payload and the habitable subsurface of these satellites involves significant risk of forward contamination. The standardization of protocols to decontaminat...

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Autores principales: Coelho, Lígia F., Blais, Marie-Amélie, Matveev, Alex, Keller-Costa, Tina, Vincent, Warwick F., Costa, Rodrigo, Martins, Zita, Canário, João
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329357/
https://www.ncbi.nlm.nih.gov/pubmed/35896693
http://dx.doi.org/10.1038/s41598-022-16370-5
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author Coelho, Lígia F.
Blais, Marie-Amélie
Matveev, Alex
Keller-Costa, Tina
Vincent, Warwick F.
Costa, Rodrigo
Martins, Zita
Canário, João
author_facet Coelho, Lígia F.
Blais, Marie-Amélie
Matveev, Alex
Keller-Costa, Tina
Vincent, Warwick F.
Costa, Rodrigo
Martins, Zita
Canário, João
author_sort Coelho, Lígia F.
collection PubMed
description Missions to detect extraterrestrial life are being designed to visit Europa and Enceladus in the next decades. The contact between the mission payload and the habitable subsurface of these satellites involves significant risk of forward contamination. The standardization of protocols to decontaminate ice cores from planetary field analogs of icy moons, and monitor the contamination in downstream analysis, has a direct application for developing clean approaches crucial to life detection missions in these satellites. Here we developed a comprehensive protocol that can be used to monitor and minimize the contamination of Arctic ice cores in processing and downstream analysis. We physically removed the exterior layers of ice cores to minimize bioburden from sampling. To monitor contamination, we constructed artificial controls and applied culture-dependent and culture-independent techniques such as 16S rRNA amplicon sequencing. We identified 13 bacterial contaminants, including a radioresistant species. This protocol decreases the contamination risk, provides quantitative and qualitative information about contamination agents, and allows validation of the results obtained. This study highlights the importance of decreasing and evaluating prokaryotic contamination in the processing of polar ice cores, including in their use as analogs of Europa and Enceladus.
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spelling pubmed-93293572022-07-29 Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus Coelho, Lígia F. Blais, Marie-Amélie Matveev, Alex Keller-Costa, Tina Vincent, Warwick F. Costa, Rodrigo Martins, Zita Canário, João Sci Rep Article Missions to detect extraterrestrial life are being designed to visit Europa and Enceladus in the next decades. The contact between the mission payload and the habitable subsurface of these satellites involves significant risk of forward contamination. The standardization of protocols to decontaminate ice cores from planetary field analogs of icy moons, and monitor the contamination in downstream analysis, has a direct application for developing clean approaches crucial to life detection missions in these satellites. Here we developed a comprehensive protocol that can be used to monitor and minimize the contamination of Arctic ice cores in processing and downstream analysis. We physically removed the exterior layers of ice cores to minimize bioburden from sampling. To monitor contamination, we constructed artificial controls and applied culture-dependent and culture-independent techniques such as 16S rRNA amplicon sequencing. We identified 13 bacterial contaminants, including a radioresistant species. This protocol decreases the contamination risk, provides quantitative and qualitative information about contamination agents, and allows validation of the results obtained. This study highlights the importance of decreasing and evaluating prokaryotic contamination in the processing of polar ice cores, including in their use as analogs of Europa and Enceladus. Nature Publishing Group UK 2022-07-27 /pmc/articles/PMC9329357/ /pubmed/35896693 http://dx.doi.org/10.1038/s41598-022-16370-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Coelho, Lígia F.
Blais, Marie-Amélie
Matveev, Alex
Keller-Costa, Tina
Vincent, Warwick F.
Costa, Rodrigo
Martins, Zita
Canário, João
Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title_full Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title_fullStr Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title_full_unstemmed Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title_short Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus
title_sort contamination analysis of arctic ice samples as planetary field analogs and implications for future life-detection missions to europa and enceladus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329357/
https://www.ncbi.nlm.nih.gov/pubmed/35896693
http://dx.doi.org/10.1038/s41598-022-16370-5
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