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Antibody-Antigen Binding Interface Analysis in the Big Data Era
Antibodies have become the Swiss Army tool for molecular biology and nanotechnology. Their outstanding ability to specifically recognise molecular antigens allows their use in many different applications from medicine to the industry. Moreover, the improvement of conventional structural biology tech...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329859/ https://www.ncbi.nlm.nih.gov/pubmed/35911958 http://dx.doi.org/10.3389/fmolb.2022.945808 |
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author | Reis, Pedro B. P. S. Barletta, German P. Gagliardi, Luca Fortuna, Sara Soler, Miguel A. Rocchia, Walter |
author_facet | Reis, Pedro B. P. S. Barletta, German P. Gagliardi, Luca Fortuna, Sara Soler, Miguel A. Rocchia, Walter |
author_sort | Reis, Pedro B. P. S. |
collection | PubMed |
description | Antibodies have become the Swiss Army tool for molecular biology and nanotechnology. Their outstanding ability to specifically recognise molecular antigens allows their use in many different applications from medicine to the industry. Moreover, the improvement of conventional structural biology techniques (e.g., X-ray, NMR) as well as the emergence of new ones (e.g., Cryo-EM), have permitted in the last years a notable increase of resolved antibody-antigen structures. This offers a unique opportunity to perform an exhaustive structural analysis of antibody-antigen interfaces by employing the large amount of data available nowadays. To leverage this factor, different geometric as well as chemical descriptors were evaluated to perform a comprehensive characterization. |
format | Online Article Text |
id | pubmed-9329859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-93298592022-07-29 Antibody-Antigen Binding Interface Analysis in the Big Data Era Reis, Pedro B. P. S. Barletta, German P. Gagliardi, Luca Fortuna, Sara Soler, Miguel A. Rocchia, Walter Front Mol Biosci Molecular Biosciences Antibodies have become the Swiss Army tool for molecular biology and nanotechnology. Their outstanding ability to specifically recognise molecular antigens allows their use in many different applications from medicine to the industry. Moreover, the improvement of conventional structural biology techniques (e.g., X-ray, NMR) as well as the emergence of new ones (e.g., Cryo-EM), have permitted in the last years a notable increase of resolved antibody-antigen structures. This offers a unique opportunity to perform an exhaustive structural analysis of antibody-antigen interfaces by employing the large amount of data available nowadays. To leverage this factor, different geometric as well as chemical descriptors were evaluated to perform a comprehensive characterization. Frontiers Media S.A. 2022-07-14 /pmc/articles/PMC9329859/ /pubmed/35911958 http://dx.doi.org/10.3389/fmolb.2022.945808 Text en Copyright © 2022 Reis, Barletta, Gagliardi, Fortuna, Soler and Rocchia. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Reis, Pedro B. P. S. Barletta, German P. Gagliardi, Luca Fortuna, Sara Soler, Miguel A. Rocchia, Walter Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title | Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title_full | Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title_fullStr | Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title_full_unstemmed | Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title_short | Antibody-Antigen Binding Interface Analysis in the Big Data Era |
title_sort | antibody-antigen binding interface analysis in the big data era |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9329859/ https://www.ncbi.nlm.nih.gov/pubmed/35911958 http://dx.doi.org/10.3389/fmolb.2022.945808 |
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