Cargando…

Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora

The unique ability of basidiomycete white rot fungi to degrade all components of plant cell walls makes them indispensable organisms in the global carbon cycle. In this study, we analyzed the proteomes of two closely related white rot fungi, Obba rivulosa and Gelatoporia subvermispora, during eight-...

Descripción completa

Detalles Bibliográficos
Autores principales: Marinovíc, Mila, Di Falco, Marcos, Aguilar Pontes, Maria Victoria, Gorzsás, András, Tsang, Adrian, de Vries, Ronald P., Mäkelä, Miia R., Hildén, Kristiina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330253/
https://www.ncbi.nlm.nih.gov/pubmed/35892327
http://dx.doi.org/10.3390/biom12081017
_version_ 1784758117595086848
author Marinovíc, Mila
Di Falco, Marcos
Aguilar Pontes, Maria Victoria
Gorzsás, András
Tsang, Adrian
de Vries, Ronald P.
Mäkelä, Miia R.
Hildén, Kristiina
author_facet Marinovíc, Mila
Di Falco, Marcos
Aguilar Pontes, Maria Victoria
Gorzsás, András
Tsang, Adrian
de Vries, Ronald P.
Mäkelä, Miia R.
Hildén, Kristiina
author_sort Marinovíc, Mila
collection PubMed
description The unique ability of basidiomycete white rot fungi to degrade all components of plant cell walls makes them indispensable organisms in the global carbon cycle. In this study, we analyzed the proteomes of two closely related white rot fungi, Obba rivulosa and Gelatoporia subvermispora, during eight-week cultivation on solid spruce wood. Plant cell wall degrading carbohydrate-active enzymes (CAZymes) represented approximately 5% of the total proteins in both species. A core set of orthologous plant cell wall degrading CAZymes was shared between these species on spruce suggesting a conserved plant biomass degradation approach in this clade of basidiomycete fungi. However, differences in time-dependent production of plant cell wall degrading enzymes may be due to differences among initial growth rates of these species on solid spruce wood. The obtained results provide insight into specific enzymes and enzyme sets that are produced during the degradation of solid spruce wood in these fungi. These findings expand the knowledge on enzyme production in nature-mimicking conditions and may contribute to the exploitation of white rot fungi and their enzymes for biotechnological applications.
format Online
Article
Text
id pubmed-9330253
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-93302532022-07-29 Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora Marinovíc, Mila Di Falco, Marcos Aguilar Pontes, Maria Victoria Gorzsás, András Tsang, Adrian de Vries, Ronald P. Mäkelä, Miia R. Hildén, Kristiina Biomolecules Article The unique ability of basidiomycete white rot fungi to degrade all components of plant cell walls makes them indispensable organisms in the global carbon cycle. In this study, we analyzed the proteomes of two closely related white rot fungi, Obba rivulosa and Gelatoporia subvermispora, during eight-week cultivation on solid spruce wood. Plant cell wall degrading carbohydrate-active enzymes (CAZymes) represented approximately 5% of the total proteins in both species. A core set of orthologous plant cell wall degrading CAZymes was shared between these species on spruce suggesting a conserved plant biomass degradation approach in this clade of basidiomycete fungi. However, differences in time-dependent production of plant cell wall degrading enzymes may be due to differences among initial growth rates of these species on solid spruce wood. The obtained results provide insight into specific enzymes and enzyme sets that are produced during the degradation of solid spruce wood in these fungi. These findings expand the knowledge on enzyme production in nature-mimicking conditions and may contribute to the exploitation of white rot fungi and their enzymes for biotechnological applications. MDPI 2022-07-22 /pmc/articles/PMC9330253/ /pubmed/35892327 http://dx.doi.org/10.3390/biom12081017 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Marinovíc, Mila
Di Falco, Marcos
Aguilar Pontes, Maria Victoria
Gorzsás, András
Tsang, Adrian
de Vries, Ronald P.
Mäkelä, Miia R.
Hildén, Kristiina
Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title_full Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title_fullStr Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title_full_unstemmed Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title_short Comparative Analysis of Enzyme Production Patterns of Lignocellulose Degradation of Two White Rot Fungi: Obba rivulosa and Gelatoporia subvermispora
title_sort comparative analysis of enzyme production patterns of lignocellulose degradation of two white rot fungi: obba rivulosa and gelatoporia subvermispora
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9330253/
https://www.ncbi.nlm.nih.gov/pubmed/35892327
http://dx.doi.org/10.3390/biom12081017
work_keys_str_mv AT marinovicmila comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT difalcomarcos comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT aguilarpontesmariavictoria comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT gorzsasandras comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT tsangadrian comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT devriesronaldp comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT makelamiiar comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora
AT hildenkristiina comparativeanalysisofenzymeproductionpatternsoflignocellulosedegradationoftwowhiterotfungiobbarivulosaandgelatoporiasubvermispora